LOCUS Exported 10049 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Expression vector pe2TetOn(PacI), complete sequence.
ACCESSION DQ349229
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 10049)
AUTHORS Backman CM, Zhang Y, Hoffer BJ, Tomac AC.
TITLE Tetracycline-inducible expression systems for the generation of
transgenic animals: a comparison of various inducible systems
carried in a single vector
JOURNAL J. Neurosci. Methods 139 (2), 257-262 (2004)
PUBMED 15488239
REFERENCE 2 (bases 1 to 10049)
AUTHORS Backman CM, Zhang Y, Hoffer BJ, Tomac AC.
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2005) DHHS, NIDA/NIH, 5500 Nathan Shock Drive,
Baltimore, MD 21224, USA
REFERENCE 3 (bases 1 to 10049)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..10049
/organism="Expression vector pe2TetOn(PacI)"
/mol_type="other DNA"
/db_xref="taxon:365454"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 679..1302
/note="internal ribosome entry site; IRES"
misc_feature 714..1287
/label=IRES
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
primer_bind 1329..1345
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 1368..2114
/codon_start=1
/product="rtTA-M2.alt"
/label=rtTA-M2.alt
/protein_id="ABC65843.1"
/translation="MSRLDKSKVINGALELLNGVGIEGLTTRKLAQKLGVEQPTLYWHV
KNKRALLDALPIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLGTR
PTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEEQEHQVAKEERETPTT
DSMPPLLRQAIELFDRQGAEPAFLFGLELIICGLEKQLKCESGGPADALDDFDLDMLPA
DALDDFDLDMLPADALDDFDLDMLPG"
polyA_signal 2124..2258
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
misc_feature 2129..2585
/label=contains SV40 polyA signal
/note="contains SV40 polyA signal"
misc_feature 2586..6962
/label=p53 intron spacer
/note="p53 intron spacer"
polyA_signal 6799..6933
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
misc_feature 6963..7430
/label=contains SV40 polyA signal
/note="contains SV40 polyA signal"
polyA_signal 7289..7423
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
regulatory 7480..7826
/regulatory_class="promoter"
/note="pTRE-tight"
promoter complement(7507..7821)
/label=tight TRE promoter
/note="Tet-responsive promoter PTight, consisting of seven
tet operator sequences followed by the minimal CMV
promoter"
protein_bind 7581..7599
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7617..7635
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7652..7670
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7688..7706
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7724..7742
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7759..7777
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7795..7813
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
promoter complement(7861..7879)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(7900..7916)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 7924..7940
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(7948..7978)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 7993..8014
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(8302..8890)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(9061..9921)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(9922..10026)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 10049 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Expression vector pe2TetOn(PacI), complete sequence.
ACCESSION DQ349229
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 10049)
AUTHORS Backman CM, Zhang Y, Hoffer BJ, Tomac AC.
TITLE Tetracycline-inducible expression systems for the generation of
transgenic animals: a comparison of various inducible systems
carried in a single vector
JOURNAL J. Neurosci. Methods 139 (2), 257-262 (2004)
PUBMED 15488239
REFERENCE 2 (bases 1 to 10049)
AUTHORS Backman CM, Zhang Y, Hoffer BJ, Tomac AC.
TITLE Direct Submission
JOURNAL Submitted (19-DEC-2005) DHHS, NIDA/NIH, 5500 Nathan Shock Drive,
Baltimore, MD 21224, USA
REFERENCE 3 (bases 1 to 10049)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..10049
/organism="Expression vector pe2TetOn(PacI)"
/mol_type="other DNA"
/db_xref="taxon:365454"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 679..1302
/note="internal ribosome entry site; IRES"
misc_feature 714..1287
/label=IRES
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
primer_bind 1329..1345
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 1368..2114
/codon_start=1
/product="rtTA-M2.alt"
/label=rtTA-M2.alt
/protein_id="ABC65843.1"
/translation="MSRLDKSKVINGALELLNGVGIEGLTTRKLAQKLGVEQPTLYWHV
KNKRALLDALPIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLGTR
PTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEEQEHQVAKEERETPTT
DSMPPLLRQAIELFDRQGAEPAFLFGLELIICGLEKQLKCESGGPADALDDFDLDMLPA
DALDDFDLDMLPADALDDFDLDMLPG"
polyA_signal 2124..2258
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
misc_feature 2129..2585
/label=contains SV40 polyA signal
/note="contains SV40 polyA signal"
misc_feature 2586..6962
/label=p53 intron spacer
/note="p53 intron spacer"
polyA_signal 6799..6933
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
misc_feature 6963..7430
/label=contains SV40 polyA signal
/note="contains SV40 polyA signal"
polyA_signal 7289..7423
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
regulatory 7480..7826
/regulatory_class="promoter"
/note="pTRE-tight"
promoter complement(7507..7821)
/label=tight TRE promoter
/note="Tet-responsive promoter PTight, consisting of seven
tet operator sequences followed by the minimal CMV
promoter"
protein_bind 7581..7599
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7617..7635
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7652..7670
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7688..7706
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7724..7742
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7759..7777
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 7795..7813
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
promoter complement(7861..7879)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(7900..7916)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 7924..7940
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(7948..7978)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 7993..8014
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(8302..8890)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(9061..9921)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(9922..10026)
/gene="bla"
/label=AmpR promoter