LOCUS Exported 4436 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Phage display vector pdvec0 DNA, complete sequence.
ACCESSION LC410040
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4436)
AUTHORS Makino Y, Ishida S, Itoh N.
TITLE Phage display vector pdvec0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4436)
AUTHORS Makino Y, Itoh N.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2018) Contact:Yoshihide Makino Toyama Prefectural
Univerisity, Department of Biotechnology, Faculty of Engineering;
5180 Kurokawa, Imizu-city, Toyama 939-0398, Japan URL
:http://www.pu-toyama.ac.jp/
REFERENCE 3 (bases 1 to 4436)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4436
/organism="Phage display vector pdvec0"
/mol_type="other DNA"
/db_xref="taxon:2267868"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
gene 217..1557
/gene="III"
/label=III
misc_feature 217..270
/gene="III"
/note="gene III signal peptide of Mq3KO7. This region
introduces the express of a protein structural gene
inserted in the downstream of this region."
misc_feature 271..336
/gene="III"
/note="A protein structural gene can be inserted in this
region. The inserted gene is expressed as a fusion peptide
of (geneIII signal peptide of M13KO7)-(polypeptide from
inserted sequence)-(geneIII mature peptide M13KO7)."
misc_feature 337..1557
/gene="III"
/label=geneIII mature peptide of M13KO7
/note="geneIII mature peptide of M13KO7"
primer_bind complement(1565..1581)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 1794..2249
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 2531..2635
/gene="bla"
/label=AmpR promoter
CDS 2636..3496
/codon_start=1
/gene="bla"
/product="beta lactamase"
/label=bla
/note="ampicillin resistance"
/protein_id="BBF25456.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 2636..3496
/gene="bla"
/label=bla
rep_origin 3667..4255
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
LOCUS Exported 4436 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Phage display vector pdvec0 DNA, complete sequence.
ACCESSION LC410040
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4436)
AUTHORS Makino Y, Ishida S, Itoh N.
TITLE Phage display vector pdvec0
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4436)
AUTHORS Makino Y, Itoh N.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2018) Contact:Yoshihide Makino Toyama Prefectural
Univerisity, Department of Biotechnology, Faculty of Engineering;
5180 Kurokawa, Imizu-city, Toyama 939-0398, Japan URL
:http://www.pu-toyama.ac.jp/
REFERENCE 3 (bases 1 to 4436)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4436
/organism="Phage display vector pdvec0"
/mol_type="other DNA"
/db_xref="taxon:2267868"
protein_bind 107..128
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
gene 217..1557
/gene="III"
/label=III
misc_feature 217..270
/gene="III"
/note="gene III signal peptide of Mq3KO7. This region
introduces the express of a protein structural gene
inserted in the downstream of this region."
misc_feature 271..336
/gene="III"
/note="A protein structural gene can be inserted in this
region. The inserted gene is expressed as a fusion peptide
of (geneIII signal peptide of M13KO7)-(polypeptide from
inserted sequence)-(geneIII mature peptide M13KO7)."
misc_feature 337..1557
/gene="III"
/label=geneIII mature peptide of M13KO7
/note="geneIII mature peptide of M13KO7"
primer_bind complement(1565..1581)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 1794..2249
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 2531..2635
/gene="bla"
/label=AmpR promoter
CDS 2636..3496
/codon_start=1
/gene="bla"
/product="beta lactamase"
/label=bla
/note="ampicillin resistance"
/protein_id="BBF25456.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 2636..3496
/gene="bla"
/label=bla
rep_origin 3667..4255
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"