Matsuyama A, Shirai A, Yashiroda Y, Kamata A, Horinouchi S, Yoshida M.
pDUAL2-HFG81 载体载体图谱
pDUAL2-HFG81 载体载体序列
LOCUS Exported 9087 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION S. pombe expression vector pDUAL2-HFG81 DNA, complete sequence.
ACCESSION AB364064
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9087)
AUTHORS Matsuyama A, Shirai A, Yashiroda Y, Kamata A, Horinouchi S, Yoshida
M.
TITLE pDUAL, a multipurpose, multicopy vector capable of chromosomal
integration in fission yeast
JOURNAL Yeast 21 (15), 1289-1305 (2004)
PUBMED 15546162
REFERENCE 2 (bases 1 to 9087)
AUTHORS Matsuyama A, Shirai A, Yoshida M.
TITLE Fission yeast multicopy and integration vector pDUAL2-HFG81
JOURNAL Published Only in Database (2007)
REFERENCE 3 (bases 1 to 9087)
AUTHORS Matsuyama A, Shirai A, Yoshida M.
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2007) Akihisa Matsuyama, RIKEN, Chemical Genetics
Laboratory; Hirosawa 2-1, Wako, Saitama 351-0198, Japan
(E-mail:akihisa@riken.jp, URL:http://cgl.riken.go.jp/,
Tel:81-48-462-1335, Fax:81-48-462-1336)
REFERENCE 4 (bases 1 to 9087)
AUTHORS .
TITLE Direct Submission
COMMENT Fission yeast expression vector.
FEATURES Location/Qualifiers
source 1..9087
/organism="Schizosaccharomyces pombe expression vector
pDUAL2-HFG81"
/mol_type="other DNA"
/db_xref="taxon:477342"
regulatory 1..237
/regulatory_class="terminator"
/gene="ADH1"
misc_feature 1..237
/gene="ADH1"
/label=derived from Saccharomyces cerevisiae
/note="derived from Saccharomyces cerevisiae"
gene 1..237
/gene="ADH1"
/label=ADH1
terminator 21..208
/gene="S. cerevisiae ADH1"
/label=ADH1 terminator
/note="transcription terminator for the S. cerevisiae
alcohol dehydrogenase 1 (ADH1) gene"
misc_feature 242..2193
/label=derived from Schizosaccharomyces pombe
/note="derived from Schizosaccharomyces pombe"
CDS join(242..618,1840..2193)
/pseudo
/gene="leu1"
/label=leu1
gene join(242..618,1840..2193)
/pseudo
/gene="leu1"
/label=leu1
rep_origin 633..1825
/standard_name="ars1"
/label=ars1
rep_origin 975..1758
/label=ars1
/note="Schizosaccharomyces pombe autonomously replicating
sequence ars1"
misc_feature 2194..5316
/label=derived from Cloning vector pUC119
/note="derived from Cloning vector pUC119"
primer_bind complement(2206..2222)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 2435..2890
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 3172..3276
/gene="bla"
/label=AmpR promoter
CDS 3277..4137
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 4308..4896
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 5184..5205
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 5220..5250
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5258..5274
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 5282..5298
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 5317..8266
/label=derived from Schizosaccharomyces pombe
/note="derived from Schizosaccharomyces pombe"
gene complement(5317..7068)
/gene="ura4"
/label=ura4
regulatory complement(5317..5746)
/regulatory_class="terminator"
/gene="ura4"
CDS complement(5747..6541)
/codon_start=1
/gene="ura4"
/product="orotidine 5-phosphate decarboxylase"
/label=ura4
/note="internal EcoRV site is eliminated."
/protein_id="BAF90760.1"
/translation="MDARVFQSYSARAEGMKNPIAKELLALMEEKQSNLSVAVDLTKKS
EILELVDKIGPYVCVIKTHIDVVEDFDQDMVEKLVALGKKHRFLIFEDRKFADIGNTVK
LQYASGVYKIASWAHITNCHTVPGEGIIQGLKEVGLPLGRGLLLLAEMSSKGSLATGSY
TEKTLEWFEKHTDFCFGFIAGRRFPNLQSDYITMSPGIGLDVKGDGLGQQYRTPEEVIV
NCGSDIIIVGRGVYGAGRNPVVEAKRYREAGWKAYQQRLSQH"
regulatory complement(6542..7068)
/regulatory_class="promoter"
/gene="ura4"
regulatory 7104..8266
/regulatory_class="promoter"
/gene="nmt1"
/note="low strength nmt1 promoter"
gene 7104..8266
/gene="nmt1"
/label=nmt1
CDS 8292..8339
/codon_start=1
/product="hexahistidine and the FLAG epitope"
/label=hexahistidine and the FLAG epitope
/protein_id="BAF90761.1"
/translation="MHHHHHHMDYKDDDDK"
CDS 8295..8312
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
CDS 8316..8339
/codon_start=1
/product="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/label=FLAG
/translation="DYKDDDDK"
CDS 8343..9056
/codon_start=1
/product="green fluorescent protein"
/label=green fluorescent protein
/note="Ser2 is substituted by Gly.; Ser65 is substituted by
Cys."
/protein_id="BAF90762.1"
/translation="MGKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFCYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"
Matsuyama A, Shirai A, Yashiroda Y, Kamata A, Horinouchi S, Yoshida M.
pDUAL2-HFG81 载体载体图谱
pDUAL2-HFG81 载体载体序列
LOCUS Exported 9087 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION S. pombe expression vector pDUAL2-HFG81 DNA, complete sequence.
ACCESSION AB364064
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9087)
AUTHORS Matsuyama A, Shirai A, Yashiroda Y, Kamata A, Horinouchi S, Yoshida
M.
TITLE pDUAL, a multipurpose, multicopy vector capable of chromosomal
integration in fission yeast
JOURNAL Yeast 21 (15), 1289-1305 (2004)
PUBMED 15546162
REFERENCE 2 (bases 1 to 9087)
AUTHORS Matsuyama A, Shirai A, Yoshida M.
TITLE Fission yeast multicopy and integration vector pDUAL2-HFG81
JOURNAL Published Only in Database (2007)
REFERENCE 3 (bases 1 to 9087)
AUTHORS Matsuyama A, Shirai A, Yoshida M.
TITLE Direct Submission
JOURNAL Submitted (15-OCT-2007) Akihisa Matsuyama, RIKEN, Chemical Genetics
Laboratory; Hirosawa 2-1, Wako, Saitama 351-0198, Japan
(E-mail:akihisa@riken.jp, URL:http://cgl.riken.go.jp/,
Tel:81-48-462-1335, Fax:81-48-462-1336)
REFERENCE 4 (bases 1 to 9087)
AUTHORS .
TITLE Direct Submission
COMMENT Fission yeast expression vector.
FEATURES Location/Qualifiers
source 1..9087
/organism="Schizosaccharomyces pombe expression vector
pDUAL2-HFG81"
/mol_type="other DNA"
/db_xref="taxon:477342"
regulatory 1..237
/regulatory_class="terminator"
/gene="ADH1"
misc_feature 1..237
/gene="ADH1"
/label=derived from Saccharomyces cerevisiae
/note="derived from Saccharomyces cerevisiae"
gene 1..237
/gene="ADH1"
/label=ADH1
terminator 21..208
/gene="S. cerevisiae ADH1"
/label=ADH1 terminator
/note="transcription terminator for the S. cerevisiae
alcohol dehydrogenase 1 (ADH1) gene"
misc_feature 242..2193
/label=derived from Schizosaccharomyces pombe
/note="derived from Schizosaccharomyces pombe"
CDS join(242..618,1840..2193)
/pseudo
/gene="leu1"
/label=leu1
gene join(242..618,1840..2193)
/pseudo
/gene="leu1"
/label=leu1
rep_origin 633..1825
/standard_name="ars1"
/label=ars1
rep_origin 975..1758
/label=ars1
/note="Schizosaccharomyces pombe autonomously replicating
sequence ars1"
misc_feature 2194..5316
/label=derived from Cloning vector pUC119
/note="derived from Cloning vector pUC119"
primer_bind complement(2206..2222)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 2435..2890
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 3172..3276
/gene="bla"
/label=AmpR promoter
CDS 3277..4137
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 4308..4896
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 5184..5205
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 5220..5250
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5258..5274
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 5282..5298
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 5317..8266
/label=derived from Schizosaccharomyces pombe
/note="derived from Schizosaccharomyces pombe"
gene complement(5317..7068)
/gene="ura4"
/label=ura4
regulatory complement(5317..5746)
/regulatory_class="terminator"
/gene="ura4"
CDS complement(5747..6541)
/codon_start=1
/gene="ura4"
/product="orotidine 5-phosphate decarboxylase"
/label=ura4
/note="internal EcoRV site is eliminated."
/protein_id="BAF90760.1"
/translation="MDARVFQSYSARAEGMKNPIAKELLALMEEKQSNLSVAVDLTKKS
EILELVDKIGPYVCVIKTHIDVVEDFDQDMVEKLVALGKKHRFLIFEDRKFADIGNTVK
LQYASGVYKIASWAHITNCHTVPGEGIIQGLKEVGLPLGRGLLLLAEMSSKGSLATGSY
TEKTLEWFEKHTDFCFGFIAGRRFPNLQSDYITMSPGIGLDVKGDGLGQQYRTPEEVIV
NCGSDIIIVGRGVYGAGRNPVVEAKRYREAGWKAYQQRLSQH"
regulatory complement(6542..7068)
/regulatory_class="promoter"
/gene="ura4"
regulatory 7104..8266
/regulatory_class="promoter"
/gene="nmt1"
/note="low strength nmt1 promoter"
gene 7104..8266
/gene="nmt1"
/label=nmt1
CDS 8292..8339
/codon_start=1
/product="hexahistidine and the FLAG epitope"
/label=hexahistidine and the FLAG epitope
/protein_id="BAF90761.1"
/translation="MHHHHHHMDYKDDDDK"
CDS 8295..8312
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
CDS 8316..8339
/codon_start=1
/product="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/label=FLAG
/translation="DYKDDDDK"
CDS 8343..9056
/codon_start=1
/product="green fluorescent protein"
/label=green fluorescent protein
/note="Ser2 is substituted by Gly.; Ser65 is substituted by
Cys."
/protein_id="BAF90762.1"
/translation="MGKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTFCYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV
NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE
FVTAAGITHGMDELYK"