| 载体基本信息 |
| 载体名称 |
pDSG387 |
载体抗性 |
Kanamycin |
| 载体长度 |
6020 bp |
载体类型 |
Cloning vector |
| 载体来源 |
Glass DS, Riedel-Kruse IH. |
pDSG387 载体载体图谱
pDSG387 载体载体序列
LOCUS Exported 6020 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pDSG387, complete sequence.
ACCESSION MH492446
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6020)
AUTHORS Glass DS, Riedel-Kruse IH.
TITLE A synthetic bacterial cell-cell adhesion toolbox for programming
multicellular morphologies and patterns
JOURNAL Cell (2018) In press
REFERENCE 2 (bases 1 to 6020)
AUTHORS Glass DS.
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2018) Bioengineering, Stanford University, 318
Campus Drive, Clark Center E350, Stanford, CA 94305, USA
REFERENCE 3 (bases 1 to 6020)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6020
/organism="Cloning vector pDSG387"
/mol_type="other DNA"
/db_xref="taxon:2268524"
misc_feature 1..689
/label=BBa_I732084
/note="BBa_I732084"
misc_feature 1..36
/label=pLacIQ (BBa_I4032, 1nt deletion)
/note="pLacIQ (BBa_I4032, 1nt deletion)"
misc_feature 45..56
/label=RBS (BBa_B0034)
/note="RBS (BBa_B0034)"
misc_feature 45..56
/label=BBa_J04500(1)
/note="BBa_J04500(1)"
RBS 45..56
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
CDS 63..686
/codon_start=1
/product="TetR"
/label=TetR
/note="BBa_I732080"
/protein_id="AXC07913.1"
/translation="MSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWHV
KNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLGTR
PTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERETPTT
DSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGS"
regulatory 698..826
/regulatory_class="terminator"
/note="double terminator (BBa_B0015)"
terminator 706..777
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 793..820
/label=T7Te terminator
/note="phage T7 early transcription terminator"
misc_feature 835..896
/label=BBa_J13002
/note="BBa_J13002"
misc_feature 835..888
/label=pTet (BBa_R0040)
/note="pTet (BBa_R0040)"
protein_bind 835..853
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 860..878
/gene="tetO"
/label=tet operator
/bound_moiety="tetracycline repressor TetR"
/note="bacterial operator O2 for the tetR and tetA genes"
misc_feature 897..908
/label=RBS (BBa_B0034)(1)
/note="RBS (BBa_B0034)(1)"
misc_feature 897..908
/label=BBa_J04500
/note="BBa_J04500"
RBS 897..908
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
CDS 915..3269
/codon_start=1
/product="mutated Neae"
/label=mutated Neae
/note="removed restriction sites"
/protein_id="AXC07912.1"
/translation="MITHGCYTRTRHKHKLKKTLIMLSAGLGLFFYVNQNSFANGENYF
KLGSDSKLLTHDSYQNRLFYTLKTGETVADLSKSQDINLSTIWSLNKHLYSSESEMMKA
APGQQIILPLKKLPFEYSALPLLGSAPLVAAGGVAGHTNKLTKMSPDVTKSNMTDDKAL
NYAAQQAASLGSQLQSRSLNGDYAKDTALGIAGNQASSQLQAWLQHYGTAEVNLQSGNN
FDGSSLDFLLPFYDSEKMLAFGQVGARYIDSRFTANLGAGQRFFLPANMLGYNVFIDQD
FSGDNTRLGIGGEYWRDYFKSSVNGYFRMSGWHESYNKKDYDERPANGFDIRFNGYLPS
YPALGAKLIYEQYYGDNVALFNSDKLQSNPGAATVGVNYTPIPLVTMGIDYRHGTGNEN
DLLYSMQFRYQFDKSWSQQIEPQYVNELRTLSGSRYDLVQRNNNIILEYKKQDILSLNI
PHDINGTEHSTQKIQLIVKSKYGLDRIVWDDSALRSQGGQIQHSGSQSAQDYQAILPAY
VQGGSNIYKVTARAYDRNGNSSNNVQLTITVLSNGQVVDQVGVTDFTADKTSAKADNAD
TITYTATVKKNGVAQANVPVSFNIVSGTATLGANSAKTDANGKATVTLKSSTPGQVVVS
AKTAEMTSALNASAVIFFDGATRQVQLQESGGGLVQAGGSLRLSCAVSGRTTSGLVITW
FRQAPGNEREFVATSAPIGSRDTTRYADSVAGRFTTSRDNAKNTIYLQMDSMKPDDTAV
YYCAAKPMFLGYTDPQRYDDWGQGTQVTVSS"
CDS 2889..3269
/codon_start=1
/product="N7-8_antiP53NLSRegHis6-R3PNR91"
/label=N7-8_antiP53NLSRegHis6-R3PNR91
/protein_id="AXC07910.1"
/translation="QVQLQESGGGLVQAGGSLRLSCAVSGRTTSGLVITWFRQAPGNER
EFVATSAPIGSRDTTRYADSVAGRFTTSRDNAKNTIYLQMDSMKPDDTAVYYCAAKPMF
LGYTDPQRYDDWGQGTQVTVSS"
misc_feature 3267..3272
/label=stop codons
/note="stop codons"
misc_feature 3273..3293
/label=biobrick suffix
/note="biobrick suffix"
regulatory 3294..3365
/regulatory_class="terminator"
/note="his operon terminator"
terminator 3294..3351
/label=his operon terminator
/note="This putative transcriptin terminator from the E.
coli his operon has a 2-bp deletion introduced during
synthesis. Its efficiency has not been determined."
misc_feature complement(3429..3446)
/label=VR primer site
/note="VR primer site"
CDS complement(3509..4324)
/codon_start=1
/product="KanR"
/label=KanR
/protein_id="AXC07911.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
misc_feature complement(4656..5480)
/label=p15A ORI
/note="p15A ORI"
rep_origin complement(4919..5463)
/direction=LEFT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
misc_feature 5881..5901
/label=VF2 primer site
/note="VF2 primer site"
terminator 5953..5996
/label=bacterial terminator
/note="putative bacterial transcription terminator"
misc_feature 5999..6020
/label=biobrick prefix
/note="biobrick prefix"