LOCUS Exported 5406 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pDONRamp, complete sequence.
ACCESSION GQ231553
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5406)
AUTHORS Song J.
TITLE MYB26 controls Arabidopsis anther dehiscence by regulating secondary
thickening in the endothecium
JOURNAL Thesis (2009) University of Nottingham, Sutton Bonington Campus,
Loughborough, UK, In press
REFERENCE 2 (bases 1 to 5406)
AUTHORS Song J.
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2009) Plant and Crop Sciences, The School of
Biosciences, Sutton Bonington Campus, University of Nottingham,
Loughborough LE12 5RD, UK
REFERENCE 3 (bases 1 to 5406)
AUTHORS .
TITLE Direct Submission
COMMENT On Sep 23, 2009 this sequence version replaced FN398073.1.
FEATURES Location/Qualifiers
source 1..5406
/organism="Cloning vector pDONRamp"
/mol_type="other DNA"
/label=ampicillin-resistant pDONR vector for BP cloning
/note="ampicillin-resistant pDONR vector for BP cloning"
/db_xref="taxon:656893"
promoter 305..323
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_recomb 374..605
/label=attP1
/note="attP1"
protein_bind 374..605
/gene="mutant version of attP"
/label=attP1
/bound_moiety="BP Clonase(TM)"
/note="recombination site for the Gateway(R) BP reaction
(pDONR(TM)201 version)"
CDS complement(1001..1306)
/codon_start=1
/gene="ccdB"
/product="CcdB"
/label=ccdB
/protein_id="ACT32138.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
gene complement(1001..1306)
/gene="ccdB"
/label=ccdB
CDS complement(1651..2310)
/codon_start=1
/gene="cmR"
/product="CmR"
/label=cmR
/note="chloramphenicol acetyltransferase"
/protein_id="ACT32139.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene complement(1651..2310)
/gene="cmR"
/label=cmR
promoter complement(2311..2413)
/label=cat promoter
/note="promoter of the E. coli cat gene encoding
chloramphenicol acetyltransferase"
misc_recomb complement(2558..2789)
/label=attP2
/note="attP2"
protein_bind complement(2558..2789)
/gene="mutant version of attP"
/label=attP2
/bound_moiety="BP Clonase(TM)"
/note="recombination site for the Gateway(R) BP reaction
(pDONR(TM)201 version)"
protein_bind 3214..3230
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3238..3268)
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
protein_bind 3283..3304
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3595..4183)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4354..5214)
/codon_start=1
/gene="ampR"
/product="AmpR"
/label=ampR
/note="bla; Ap(r) determinant"
/protein_id="ACT32140.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(4354..5214)
/gene="ampR"
/label=ampR
promoter complement(5215..5319)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 5406 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pDONRamp, complete sequence.
ACCESSION GQ231553
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5406)
AUTHORS Song J.
TITLE MYB26 controls Arabidopsis anther dehiscence by regulating secondary
thickening in the endothecium
JOURNAL Thesis (2009) University of Nottingham, Sutton Bonington Campus,
Loughborough, UK, In press
REFERENCE 2 (bases 1 to 5406)
AUTHORS Song J.
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2009) Plant and Crop Sciences, The School of
Biosciences, Sutton Bonington Campus, University of Nottingham,
Loughborough LE12 5RD, UK
REFERENCE 3 (bases 1 to 5406)
AUTHORS .
TITLE Direct Submission
COMMENT On Sep 23, 2009 this sequence version replaced FN398073.1.
FEATURES Location/Qualifiers
source 1..5406
/organism="Cloning vector pDONRamp"
/mol_type="other DNA"
/label=ampicillin-resistant pDONR vector for BP cloning
/note="ampicillin-resistant pDONR vector for BP cloning"
/db_xref="taxon:656893"
promoter 305..323
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_recomb 374..605
/label=attP1
/note="attP1"
protein_bind 374..605
/gene="mutant version of attP"
/label=attP1
/bound_moiety="BP Clonase(TM)"
/note="recombination site for the Gateway(R) BP reaction
(pDONR(TM)201 version)"
CDS complement(1001..1306)
/codon_start=1
/gene="ccdB"
/product="CcdB"
/label=ccdB
/protein_id="ACT32138.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
gene complement(1001..1306)
/gene="ccdB"
/label=ccdB
CDS complement(1651..2310)
/codon_start=1
/gene="cmR"
/product="CmR"
/label=cmR
/note="chloramphenicol acetyltransferase"
/protein_id="ACT32139.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene complement(1651..2310)
/gene="cmR"
/label=cmR
promoter complement(2311..2413)
/label=cat promoter
/note="promoter of the E. coli cat gene encoding
chloramphenicol acetyltransferase"
misc_recomb complement(2558..2789)
/label=attP2
/note="attP2"
protein_bind complement(2558..2789)
/gene="mutant version of attP"
/label=attP2
/bound_moiety="BP Clonase(TM)"
/note="recombination site for the Gateway(R) BP reaction
(pDONR(TM)201 version)"
protein_bind 3214..3230
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3238..3268)
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
protein_bind 3283..3304
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3595..4183)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4354..5214)
/codon_start=1
/gene="ampR"
/product="AmpR"
/label=ampR
/note="bla; Ap(r) determinant"
/protein_id="ACT32140.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(4354..5214)
/gene="ampR"
/label=ampR
promoter complement(5215..5319)
/gene="bla"
/label=AmpR promoter