LOCUS Exported 4398 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pCST5, complete sequence.
ACCESSION HQ536208
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4398)
AUTHORS Cote P, Sulea T, Dignard D, Wu C, Whiteway M.
TITLE Evolutionary reshaping of fungal mating pathway scaffold proteins
JOURNAL MBio 2 (1), e00230-10 (2011)
PUBMED 21249169
REFERENCE 2 (bases 1 to 4398)
AUTHORS Cote P.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2010) Health Sector, CNRC-BRI, 6100 Royalmount
Av., Montreal, QC H4P2R2, Canada
REFERENCE 3 (bases 1 to 4398)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4398
/organism="Cloning vector pCST5"
/mol_type="other DNA"
/db_xref="taxon:978308"
CDS 411..1562
/codon_start=1
/gene="CST5"
/product="Cst5"
/label=CST5
/note="ORF19.2127; similar to Candida albicans STE5"
/protein_id="ADW40657.1"
/translation="MLQSTPKSWKDFLKSPKKPTSPTTPPGSVTITPNTTPPSVPCVSP
RPAKIPSRDPFQTINPGLNLSFANILNKSLANHETCFICGELLSTVFASERILKLNCGD
STHSECFKAYFKEDIPHARIHGKTITFAKTCRGLNCSGTRNVVVDVNNWHLVSARKLSL
IPKRPAPPHPNSVNINALKTTLQNSDIPTRSPSPDPTVSTTTEVDAYEVETVRNQLIKY
LLDLCPKINLSRLVLLGNLRVADELSVCVEPLDYFQTRYVYLFENYMVIWNSVDYPVFV
PMQNIQISSRGSSILQVRQKDDGLSTLIQSTSSTVVEKWVVAISDAHLQLPAPDITSTI
DTSPSDSDSDIDSDEEVIQQALTKNNWADLMIEIDNALLTSDP"
gene 411..1562
/gene="CST5"
/label=CST5
primer_bind complement(2160..2176)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2213..2231)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2252..2268)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2276..2292
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2300..2330)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2345..2366
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2654..3242)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3413..4273)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4274..4378)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 4398 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pCST5, complete sequence.
ACCESSION HQ536208
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4398)
AUTHORS Cote P, Sulea T, Dignard D, Wu C, Whiteway M.
TITLE Evolutionary reshaping of fungal mating pathway scaffold proteins
JOURNAL MBio 2 (1), e00230-10 (2011)
PUBMED 21249169
REFERENCE 2 (bases 1 to 4398)
AUTHORS Cote P.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2010) Health Sector, CNRC-BRI, 6100 Royalmount
Av., Montreal, QC H4P2R2, Canada
REFERENCE 3 (bases 1 to 4398)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4398
/organism="Cloning vector pCST5"
/mol_type="other DNA"
/db_xref="taxon:978308"
CDS 411..1562
/codon_start=1
/gene="CST5"
/product="Cst5"
/label=CST5
/note="ORF19.2127; similar to Candida albicans STE5"
/protein_id="ADW40657.1"
/translation="MLQSTPKSWKDFLKSPKKPTSPTTPPGSVTITPNTTPPSVPCVSP
RPAKIPSRDPFQTINPGLNLSFANILNKSLANHETCFICGELLSTVFASERILKLNCGD
STHSECFKAYFKEDIPHARIHGKTITFAKTCRGLNCSGTRNVVVDVNNWHLVSARKLSL
IPKRPAPPHPNSVNINALKTTLQNSDIPTRSPSPDPTVSTTTEVDAYEVETVRNQLIKY
LLDLCPKINLSRLVLLGNLRVADELSVCVEPLDYFQTRYVYLFENYMVIWNSVDYPVFV
PMQNIQISSRGSSILQVRQKDDGLSTLIQSTSSTVVEKWVVAISDAHLQLPAPDITSTI
DTSPSDSDSDIDSDEEVIQQALTKNNWADLMIEIDNALLTSDP"
gene 411..1562
/gene="CST5"
/label=CST5
primer_bind complement(2160..2176)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2213..2231)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2252..2268)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2276..2292
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2300..2330)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2345..2366
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2654..3242)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3413..4273)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4274..4378)
/gene="bla"
/label=AmpR promoter