LOCUS Exported 6220 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pCST5-URA3, complete sequence.
ACCESSION HQ536211
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6220)
AUTHORS Cote P, Sulea T, Dignard D, Wu C, Whiteway M.
TITLE Evolutionary reshaping of fungal mating pathway scaffold proteins
JOURNAL MBio 2 (1), e00230-10 (2011)
PUBMED 21249169
REFERENCE 2 (bases 1 to 6220)
AUTHORS Cote P.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2010) Health Sector, CNRC-BRI, 6100 Royalmount
Av., Montreal, QC H4P2R2, Canada
REFERENCE 3 (bases 1 to 6220)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6220
/organism="Cloning vector pCST5-URA3"
/mol_type="other DNA"
/db_xref="taxon:978309"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 1124..1936
/codon_start=1
/product="URA3"
/label=URA3
/note="selectable marker"
/protein_id="ADW40665.1"
/translation="MTVNTKTYSERAETHASPVAQRLFRLMELKKTNLCASIDVDTTKE
FLELIDKLGPYVCLIKTHIDIINDFSYESTIEPLLELSRKHQFMIFEDRKFADIGNTVK
KQYIGGVYKISSWADITNAHGVTGNGVVEGLKQGAKETTTNQEPRGLLMLAELSSVGSL
AYGEYSQKTVEIAKSDKEFVIGFIAQRDMGGQEEGFDWLIMTPGVGLDDKGDGLGQQYR
TVDEVVSTGTDIIIVGRGLFGKGRDPDIEGKRYRNAGWNAYLKKTGQL"
primer_bind 2060..2076
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 2746..3897
/codon_start=1
/product="Cst5"
/label=Cst5
/note="similar to Candida albicans STE5"
/protein_id="ADW40664.1"
/translation="MLQSTPKSWKDFLKSPKKPTSPTTPPGSVTITPNTTPPSVPCVSP
RPAKIPSRDPFQTINPGLNLSFANILNKSLANHETCFICGELLSTVFASERILKLNCGD
STHSECFKAYFKEDIPHARIHGKTITFAKTCRGLNCSGTRNVVVDVNNWHLVSARKLSL
IPKRPAPPHPNSVNINALKTTLQNSDIPTRSPSPDPTVSTTTEVDAYEVETVRNQLIKY
LLDLCPKINLSRLVLLGNLRVADELSVCVEPLDYFQTRYVYLFENYMVIWNSVDYPVFV
PMQNIQISSRGSSILQVRQKDDGLSTLIQSTSSTVVEKWVVAISDAHLQLPAPDITSTI
DTSPSDSDSDIDSDEEVIQQALTKNNWADLMIEIDNALLTSDP"
promoter complement(3979..3997)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(4018..4034)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4042..4058
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4066..4096)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4111..4132
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4420..5008)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5727..6105)
/label=ISS
/note="immunostimulatory sequence from the AmpR gene;
contains unmethylated CpG dinucleotides in the context of
5-AACGTT-3 (Sato et al., 1996)"
LOCUS Exported 6220 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pCST5-URA3, complete sequence.
ACCESSION HQ536211
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6220)
AUTHORS Cote P, Sulea T, Dignard D, Wu C, Whiteway M.
TITLE Evolutionary reshaping of fungal mating pathway scaffold proteins
JOURNAL MBio 2 (1), e00230-10 (2011)
PUBMED 21249169
REFERENCE 2 (bases 1 to 6220)
AUTHORS Cote P.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2010) Health Sector, CNRC-BRI, 6100 Royalmount
Av., Montreal, QC H4P2R2, Canada
REFERENCE 3 (bases 1 to 6220)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..6220
/organism="Cloning vector pCST5-URA3"
/mol_type="other DNA"
/db_xref="taxon:978309"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 1124..1936
/codon_start=1
/product="URA3"
/label=URA3
/note="selectable marker"
/protein_id="ADW40665.1"
/translation="MTVNTKTYSERAETHASPVAQRLFRLMELKKTNLCASIDVDTTKE
FLELIDKLGPYVCLIKTHIDIINDFSYESTIEPLLELSRKHQFMIFEDRKFADIGNTVK
KQYIGGVYKISSWADITNAHGVTGNGVVEGLKQGAKETTTNQEPRGLLMLAELSSVGSL
AYGEYSQKTVEIAKSDKEFVIGFIAQRDMGGQEEGFDWLIMTPGVGLDDKGDGLGQQYR
TVDEVVSTGTDIIIVGRGLFGKGRDPDIEGKRYRNAGWNAYLKKTGQL"
primer_bind 2060..2076
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
CDS 2746..3897
/codon_start=1
/product="Cst5"
/label=Cst5
/note="similar to Candida albicans STE5"
/protein_id="ADW40664.1"
/translation="MLQSTPKSWKDFLKSPKKPTSPTTPPGSVTITPNTTPPSVPCVSP
RPAKIPSRDPFQTINPGLNLSFANILNKSLANHETCFICGELLSTVFASERILKLNCGD
STHSECFKAYFKEDIPHARIHGKTITFAKTCRGLNCSGTRNVVVDVNNWHLVSARKLSL
IPKRPAPPHPNSVNINALKTTLQNSDIPTRSPSPDPTVSTTTEVDAYEVETVRNQLIKY
LLDLCPKINLSRLVLLGNLRVADELSVCVEPLDYFQTRYVYLFENYMVIWNSVDYPVFV
PMQNIQISSRGSSILQVRQKDDGLSTLIQSTSSTVVEKWVVAISDAHLQLPAPDITSTI
DTSPSDSDSDIDSDEEVIQQALTKNNWADLMIEIDNALLTSDP"
promoter complement(3979..3997)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(4018..4034)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 4042..4058
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4066..4096)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4111..4132
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4420..5008)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5727..6105)
/label=ISS
/note="immunostimulatory sequence from the AmpR gene;
contains unmethylated CpG dinucleotides in the context of
5-AACGTT-3 (Sato et al., 1996)"