LOCUS Exported 7724 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pCST5-act1, complete sequence.
ACCESSION HQ536213
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7724)
AUTHORS Cote P, Sulea T, Dignard D, Wu C, Whiteway M.
TITLE Evolutionary reshaping of fungal mating pathway scaffold proteins
JOURNAL MBio 2 (1), e00230-10 (2011)
PUBMED 21249169
REFERENCE 2 (bases 1 to 7724)
AUTHORS Cote P.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2010) Health Sector, CNRC-BRI, 6100 Royalmount
Av., Montreal, QC H4P2R2, Canada
REFERENCE 3 (bases 1 to 7724)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7724
/organism="Cloning vector pCST5-act1"
/mol_type="other DNA"
/db_xref="taxon:978310"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 1124..1936
/codon_start=1
/product="URA3"
/label=URA3
/note="selectable marker"
/protein_id="ADW40668.1"
/translation="MTVNTKTYSERAETHASPVAQRLFRLMELKKTNLCASIDVDTTKE
FLELIDKLGPYVCLIKTHIDIINDFSYESTIEPLLELSRKHQFMIFEDRKFADIGNTVK
KQYIGGVYKISSWADITNAHGVTGNGVVEGLKQGAKETTTNQEPRGLLMLAELSSVGSL
AYGEYSQKTVEIAKSDKEFVIGFIAQRDMGGQEEGFDWLIMTPGVGLDDKGDGLGQQYR
TVDEVVSTGTDIIIVGRGLFGKGRDPDIEGKRYRNAGWNAYLKKTGQL"
primer_bind 2060..2076
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
CDS complement(3068..4219)
/codon_start=1
/product="Cst5"
/label=Cst5
/note="similar to Candida albicans STE5"
/protein_id="ADW40669.1"
/translation="MLQSTPKSWKDFLKSPKKPTSPTTPPGSVTITPNTTPPSVPCVSP
RPAKIPSRDPFQTINPGLNLSFANILNKSLANHETCFICGELLSTVFASERILKLNCGD
STHSECFKAYFKEDIPHARIHGKTITFAKTCRGLNCSGTRNVVVDVNNWHLVSARKLSL
IPKRPAPPHPNSVNINALKTTLQNSDIPTRSPSPDPTVSTTTEVDAYEVETVRNQLIKY
LLDLCPKINLSRLVLLGNLRVADELSVCVEPLDYFQTRYVYLFENYMVIWNSVDYPVFV
PMQNIQISSRGSSILQVRQKDDGLSTLIQSTSSTVVEKWVVAISDAHLQLPAPDITSTI
DTSPSDSDSDIDSDEEVIQQALTKNNWADLMIEIDNALLTSDP"
regulatory complement(4427..5450)
/regulatory_class="promoter"
/note="ACT1"
promoter complement(5483..5501)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(5522..5538)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 5546..5562
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(5570..5600)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5615..5636
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(5924..6512)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(7231..7609)
/label=ISS
/note="immunostimulatory sequence from the AmpR gene;
contains unmethylated CpG dinucleotides in the context of
5-AACGTT-3 (Sato et al., 1996)"
LOCUS Exported 7724 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pCST5-act1, complete sequence.
ACCESSION HQ536213
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7724)
AUTHORS Cote P, Sulea T, Dignard D, Wu C, Whiteway M.
TITLE Evolutionary reshaping of fungal mating pathway scaffold proteins
JOURNAL MBio 2 (1), e00230-10 (2011)
PUBMED 21249169
REFERENCE 2 (bases 1 to 7724)
AUTHORS Cote P.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2010) Health Sector, CNRC-BRI, 6100 Royalmount
Av., Montreal, QC H4P2R2, Canada
REFERENCE 3 (bases 1 to 7724)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7724
/organism="Cloning vector pCST5-act1"
/mol_type="other DNA"
/db_xref="taxon:978310"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 1124..1936
/codon_start=1
/product="URA3"
/label=URA3
/note="selectable marker"
/protein_id="ADW40668.1"
/translation="MTVNTKTYSERAETHASPVAQRLFRLMELKKTNLCASIDVDTTKE
FLELIDKLGPYVCLIKTHIDIINDFSYESTIEPLLELSRKHQFMIFEDRKFADIGNTVK
KQYIGGVYKISSWADITNAHGVTGNGVVEGLKQGAKETTTNQEPRGLLMLAELSSVGSL
AYGEYSQKTVEIAKSDKEFVIGFIAQRDMGGQEEGFDWLIMTPGVGLDDKGDGLGQQYR
TVDEVVSTGTDIIIVGRGLFGKGRDPDIEGKRYRNAGWNAYLKKTGQL"
primer_bind 2060..2076
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
CDS complement(3068..4219)
/codon_start=1
/product="Cst5"
/label=Cst5
/note="similar to Candida albicans STE5"
/protein_id="ADW40669.1"
/translation="MLQSTPKSWKDFLKSPKKPTSPTTPPGSVTITPNTTPPSVPCVSP
RPAKIPSRDPFQTINPGLNLSFANILNKSLANHETCFICGELLSTVFASERILKLNCGD
STHSECFKAYFKEDIPHARIHGKTITFAKTCRGLNCSGTRNVVVDVNNWHLVSARKLSL
IPKRPAPPHPNSVNINALKTTLQNSDIPTRSPSPDPTVSTTTEVDAYEVETVRNQLIKY
LLDLCPKINLSRLVLLGNLRVADELSVCVEPLDYFQTRYVYLFENYMVIWNSVDYPVFV
PMQNIQISSRGSSILQVRQKDDGLSTLIQSTSSTVVEKWVVAISDAHLQLPAPDITSTI
DTSPSDSDSDIDSDEEVIQQALTKNNWADLMIEIDNALLTSDP"
regulatory complement(4427..5450)
/regulatory_class="promoter"
/note="ACT1"
promoter complement(5483..5501)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(5522..5538)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 5546..5562
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(5570..5600)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5615..5636
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(5924..6512)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(7231..7609)
/label=ISS
/note="immunostimulatory sequence from the AmpR gene;
contains unmethylated CpG dinucleotides in the context of
5-AACGTT-3 (Sato et al., 1996)"