LOCUS Exported 4051 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Shuttle vector pCRB1 DNA, complete sequence.
ACCESSION AB444682
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4051)
AUTHORS Tsuchida Y, Kimura S, Suzuki N, Inui M, Yukawa H.
TITLE Characterization of a 24-kb plasmid pCGR2 newly isolated from
Corynebacterium glutamicum
JOURNAL Appl. Microbiol. Biotechnol. 87 (5), 1855-1866 (2010)
PUBMED 20552356
REFERENCE 2 (bases 1 to 4051)
AUTHORS Inui M, Suzuki N, Nakata K, Yukawa H.
TITLE Direct Submission
JOURNAL Submitted (03-JUL-2008) Contact:Masayuki Inui Research Institute of
Innovative Technology for the Earth, Molecular Microbiology and
Biotechnology Group; 9-2 kizugawadai, kizugawa, kyoto 619-0292,
Japan URL :http://www.rite.or.jp/
REFERENCE 3 (bases 1 to 4051)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4051
/organism="Shuttle vector pCRB1"
/mol_type="other DNA"
/note="Corynebacterium glutamicum-Escherichia coli shuttle
vector"
/db_xref="taxon:545645"
misc_feature 1..2233
/note="derived from Escherichia coli cloning vector
pHSG398"
promoter 101..203
/label=cat promoter
/note="promoter of the E. coli cat gene encoding
chloramphenicol acetyltransferase"
CDS 204..863
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/protein_id="BAG54975.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene 204..863
/gene="cat"
/label=cat
protein_bind 1071..1092
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 1107..1137
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1145..1161
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 1169..1185
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 1181..1411
/codon_start=1
/product="lac alpha"
/label=lac alpha
/protein_id="BAG54976.1"
/translation="MTMITPNSSSVPGDPLESTCRHASLLAVVLQRRDWENPGVTQLNR
LAAHPPFASWRNSEEARTDRPSQQLRSLNGE"
misc_feature 1198..1254
/label=MCS, multiple cloning site
/note="MCS, multiple cloning site"
primer_bind complement(1255..1271)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(1597..2185)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 2237..4051
/note="derived from Brevibacterium lactofermentum cryptric
plasmid pBL1"
CDS 2760..3965
/codon_start=1
/gene="rep"
/product="replicase"
/label=rep
/protein_id="BAG54977.1"
/translation="MYKITNSKALAGCHRWRRDEAVAVSWSSNGASQFEGLQNSHSRWG
SPLAELEVMGERRIELAIATKNHLAAGGALMMFVGTVRHNRSQSFAQVEAGIKTAYSSM
VKTSQWKKERARYGVEHTYSDYEVTDSWANGWHLHRNMLLFLDRPLSDDELKAFEDSMF
SRWSAGVVKAGMDAPLREHGVKLDQVSTWGGDAAKMATYLAKGMSQELTGSATKTASKG
SYTPFQMLDMLADQSDAGEDMDAVLVARWREYEVGSKNLRSSWSRGAKRALGIDYIDAD
VRREMEEELYKLAGLEAPERVESTRVAVALVKPDDWKLIQSDFAVRQYVLDCVDKAKDV
AAAQRVANEVLASLGVDSTPCMIVMDDVDLDAVLPTHGDATKRDLNAAVFAGNEQTILR
TH"
gene 2760..3965
/gene="rep"
/label=rep
LOCUS Exported 4051 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Shuttle vector pCRB1 DNA, complete sequence.
ACCESSION AB444682
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4051)
AUTHORS Tsuchida Y, Kimura S, Suzuki N, Inui M, Yukawa H.
TITLE Characterization of a 24-kb plasmid pCGR2 newly isolated from
Corynebacterium glutamicum
JOURNAL Appl. Microbiol. Biotechnol. 87 (5), 1855-1866 (2010)
PUBMED 20552356
REFERENCE 2 (bases 1 to 4051)
AUTHORS Inui M, Suzuki N, Nakata K, Yukawa H.
TITLE Direct Submission
JOURNAL Submitted (03-JUL-2008) Contact:Masayuki Inui Research Institute of
Innovative Technology for the Earth, Molecular Microbiology and
Biotechnology Group; 9-2 kizugawadai, kizugawa, kyoto 619-0292,
Japan URL :http://www.rite.or.jp/
REFERENCE 3 (bases 1 to 4051)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4051
/organism="Shuttle vector pCRB1"
/mol_type="other DNA"
/note="Corynebacterium glutamicum-Escherichia coli shuttle
vector"
/db_xref="taxon:545645"
misc_feature 1..2233
/note="derived from Escherichia coli cloning vector
pHSG398"
promoter 101..203
/label=cat promoter
/note="promoter of the E. coli cat gene encoding
chloramphenicol acetyltransferase"
CDS 204..863
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/protein_id="BAG54975.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene 204..863
/gene="cat"
/label=cat
protein_bind 1071..1092
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 1107..1137
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1145..1161
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 1169..1185
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 1181..1411
/codon_start=1
/product="lac alpha"
/label=lac alpha
/protein_id="BAG54976.1"
/translation="MTMITPNSSSVPGDPLESTCRHASLLAVVLQRRDWENPGVTQLNR
LAAHPPFASWRNSEEARTDRPSQQLRSLNGE"
misc_feature 1198..1254
/label=MCS, multiple cloning site
/note="MCS, multiple cloning site"
primer_bind complement(1255..1271)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(1597..2185)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 2237..4051
/note="derived from Brevibacterium lactofermentum cryptric
plasmid pBL1"
CDS 2760..3965
/codon_start=1
/gene="rep"
/product="replicase"
/label=rep
/protein_id="BAG54977.1"
/translation="MYKITNSKALAGCHRWRRDEAVAVSWSSNGASQFEGLQNSHSRWG
SPLAELEVMGERRIELAIATKNHLAAGGALMMFVGTVRHNRSQSFAQVEAGIKTAYSSM
VKTSQWKKERARYGVEHTYSDYEVTDSWANGWHLHRNMLLFLDRPLSDDELKAFEDSMF
SRWSAGVVKAGMDAPLREHGVKLDQVSTWGGDAAKMATYLAKGMSQELTGSATKTASKG
SYTPFQMLDMLADQSDAGEDMDAVLVARWREYEVGSKNLRSSWSRGAKRALGIDYIDAD
VRREMEEELYKLAGLEAPERVESTRVAVALVKPDDWKLIQSDFAVRQYVLDCVDKAKDV
AAAQRVANEVLASLGVDSTPCMIVMDDVDLDAVLPTHGDATKRDLNAAVFAGNEQTILR
TH"
gene 2760..3965
/gene="rep"
/label=rep