LOCUS Exported 4970 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cre-lox Univector acceptor vector pCR704, complete sequence.
ACCESSION FJ750580
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4970)
AUTHORS Jia F, Gampala SS, Mittal A, Luo Q, Rock CD.
TITLE Cre-lox univector acceptor vectors for functional screening in
protoplasts: analysis of Arabidopsis donor cDNAs encoding ABSCISIC
ACID INSENSITIVE1-like protein phosphatases
JOURNAL Plant Mol. Biol. 70 (6), 693-708 (2009)
PUBMED 19499346
REFERENCE 2 (bases 1 to 4970)
AUTHORS Rock CD, Jia F, Gampala SSL., Mittal A, Luo Q.
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2009) Biological Science, Texas Tech University,
2500 Broadway, Lubbock, TX 79409, USA
REFERENCE 3 (bases 1 to 4970)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4970
/organism="Cre-lox Univector acceptor vector pCR704"
/mol_type="other DNA"
/db_xref="taxon:622364"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 411..2402
/label=Ubi promoter
/note="maize polyubiquitin gene promoter"
regulatory 414..2420
/regulatory_class="promoter"
/note="maize ubiquitin (Ubi-1) promoter"
misc_feature 2421..2480
/label=2 x FLAG epitope tag
/note="2 x FLAG epitope tag"
CDS 2427..2450
/codon_start=1
/product="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/label=FLAG
/translation="DYKDDDDK"
CDS 2454..2477
/codon_start=1
/product="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/label=FLAG
/translation="DYKDDDDK"
misc_feature 2481..2514
/label=loxH recombination site
/note="loxH recombination site"
protein_bind 2481..2514
/label=loxH
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT). The loxH variant was optimized for
expression constructs but remains compatible with loxP."
regulatory 2515..2734
/regulatory_class="terminator"
/note="Cauliflower mosaic virus (CaMV) 35S terminator"
misc_feature 2735..413
/label=pUC18 cloning vector
/note="pUC18 cloning vector"
primer_bind complement(2749..2765)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2773..2789
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2797..2827)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2842..2863
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3151..3739)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3910..4770)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4771..4875)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 4970 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cre-lox Univector acceptor vector pCR704, complete sequence.
ACCESSION FJ750580
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4970)
AUTHORS Jia F, Gampala SS, Mittal A, Luo Q, Rock CD.
TITLE Cre-lox univector acceptor vectors for functional screening in
protoplasts: analysis of Arabidopsis donor cDNAs encoding ABSCISIC
ACID INSENSITIVE1-like protein phosphatases
JOURNAL Plant Mol. Biol. 70 (6), 693-708 (2009)
PUBMED 19499346
REFERENCE 2 (bases 1 to 4970)
AUTHORS Rock CD, Jia F, Gampala SSL., Mittal A, Luo Q.
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2009) Biological Science, Texas Tech University,
2500 Broadway, Lubbock, TX 79409, USA
REFERENCE 3 (bases 1 to 4970)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4970
/organism="Cre-lox Univector acceptor vector pCR704"
/mol_type="other DNA"
/db_xref="taxon:622364"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 411..2402
/label=Ubi promoter
/note="maize polyubiquitin gene promoter"
regulatory 414..2420
/regulatory_class="promoter"
/note="maize ubiquitin (Ubi-1) promoter"
misc_feature 2421..2480
/label=2 x FLAG epitope tag
/note="2 x FLAG epitope tag"
CDS 2427..2450
/codon_start=1
/product="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/label=FLAG
/translation="DYKDDDDK"
CDS 2454..2477
/codon_start=1
/product="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/label=FLAG
/translation="DYKDDDDK"
misc_feature 2481..2514
/label=loxH recombination site
/note="loxH recombination site"
protein_bind 2481..2514
/label=loxH
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT). The loxH variant was optimized for
expression constructs but remains compatible with loxP."
regulatory 2515..2734
/regulatory_class="terminator"
/note="Cauliflower mosaic virus (CaMV) 35S terminator"
misc_feature 2735..413
/label=pUC18 cloning vector
/note="pUC18 cloning vector"
primer_bind complement(2749..2765)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2773..2789
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2797..2827)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2842..2863
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3151..3739)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3910..4770)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4771..4875)
/gene="bla"
/label=AmpR promoter