Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T, Obuchowski M.
pCotC-N 载体载体图谱
pCotC-N 载体载体序列
LOCUS Exported 5465 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pCotC-N, complete sequence.
ACCESSION KF933401
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5465)
AUTHORS Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T,
Obuchowski M.
TITLE Vector system for spore sufrace display
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5465)
AUTHORS Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T,
Obuchowski M.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2013) Laboratory of Molecular Bacteriology,
Medical University of Gdansk, Debinki 1, Gdansk 80-211, Poland
REFERENCE 3 (bases 1 to 5465)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: Vectro NTI Advanced v. 10
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5465
/organism="Cloning vector pCotC-N"
/mol_type="other DNA"
/db_xref="taxon:1449696"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_recomb complement(401..873)
/label=C-terminal part of lacA
/note="C-terminal part of lacA"
gene 986..1268
/gene="cotC"
/label=cotC
regulatory 986..1032
/regulatory_class="promoter"
/gene="cotC"
regulatory 1040..1045
/regulatory_class="ribosome_binding_site"
/gene="cotC"
CDS 1053..1268
/codon_start=1
/gene="cotC"
/product="CotC"
/label=cotC
/note="spore coat protein"
/protein_id="AHG54607.1"
/translation="MGTRGSGYYKKYKEEYYTVKKTYYKKYYEYDKKDYDCDYDKKYDD
YDKKYYDHDKKDYDYVVEYKKHKKHY"
misc_feature 1056..1070
/gene="cotC"
/label=multiple cloning site
/note="multiple cloning site"
gene 1333..2828
/gene="hisD"
/label=hisD
regulatory 1333..1518
/regulatory_class="promoter"
/gene="hisD"
/note="promoter region"
CDS 1545..2828
/codon_start=1
/gene="hisD"
/product="HisD"
/label=hisD
/note="histidinol dehydrogenase"
/protein_id="AHG54608.1"
/translation="MKIKTISGAERLSLKRSIDAGTEEQRKTVRSIIEDVKANGDQAVR
SYTAKFDCIEIDSPLVTKEEFEEAYTSLDSRLLQVIRQAIENIREYHERQLQSSWFYHR
KDGTMLGQKVTALDSAGVYVPGGTAAYPSSVLMNVIPALVAGVERIVLVTPPGKDGLLS
PGVLVAAAELGIKDIYKMGGAQAIAALAYGTETIEPVDKITGPGNIYVALAKREVFGDV
DIDMIAGPSEIVVLADETAIPSEIAADLLSQAEHDKLSSCVFVTDSMALAETVSAEVNK
QLETLPRREIAEASVRDYGCIYVAETMVEAIETVNTLAPEHLEIITQSPEALLGSIKHA
GAIFLGRYSPEPVGDYFAGPNHVLPTNGTARFSSPLNVTDFQKKSSIISYSQSAFEEHA
ESIAAFARLEGLEAHARSIEARERRISK"
misc_recomb complement(2847..3225)
/label=N terminal part of lacA
/note="N terminal part of lacA"
primer_bind complement(3244..3260)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 3268..3284
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3292..3322)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3337..3358
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3638..4310)
/direction=LEFT
/label=ColE1
/note="ColE1"
rep_origin complement(3646..4234)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4405..5265)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="AHG54606.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(4405..5265)
/gene="bla"
/label=bla
promoter complement(5266..5370)
/gene="bla"
/label=AmpR promoter
Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T, Obuchowski M.
pCotC-N 载体载体图谱
pCotC-N 载体载体序列
LOCUS Exported 5465 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pCotC-N, complete sequence.
ACCESSION KF933401
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5465)
AUTHORS Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T,
Obuchowski M.
TITLE Vector system for spore sufrace display
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5465)
AUTHORS Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T,
Obuchowski M.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2013) Laboratory of Molecular Bacteriology,
Medical University of Gdansk, Debinki 1, Gdansk 80-211, Poland
REFERENCE 3 (bases 1 to 5465)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: Vectro NTI Advanced v. 10
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5465
/organism="Cloning vector pCotC-N"
/mol_type="other DNA"
/db_xref="taxon:1449696"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_recomb complement(401..873)
/label=C-terminal part of lacA
/note="C-terminal part of lacA"
gene 986..1268
/gene="cotC"
/label=cotC
regulatory 986..1032
/regulatory_class="promoter"
/gene="cotC"
regulatory 1040..1045
/regulatory_class="ribosome_binding_site"
/gene="cotC"
CDS 1053..1268
/codon_start=1
/gene="cotC"
/product="CotC"
/label=cotC
/note="spore coat protein"
/protein_id="AHG54607.1"
/translation="MGTRGSGYYKKYKEEYYTVKKTYYKKYYEYDKKDYDCDYDKKYDD
YDKKYYDHDKKDYDYVVEYKKHKKHY"
misc_feature 1056..1070
/gene="cotC"
/label=multiple cloning site
/note="multiple cloning site"
gene 1333..2828
/gene="hisD"
/label=hisD
regulatory 1333..1518
/regulatory_class="promoter"
/gene="hisD"
/note="promoter region"
CDS 1545..2828
/codon_start=1
/gene="hisD"
/product="HisD"
/label=hisD
/note="histidinol dehydrogenase"
/protein_id="AHG54608.1"
/translation="MKIKTISGAERLSLKRSIDAGTEEQRKTVRSIIEDVKANGDQAVR
SYTAKFDCIEIDSPLVTKEEFEEAYTSLDSRLLQVIRQAIENIREYHERQLQSSWFYHR
KDGTMLGQKVTALDSAGVYVPGGTAAYPSSVLMNVIPALVAGVERIVLVTPPGKDGLLS
PGVLVAAAELGIKDIYKMGGAQAIAALAYGTETIEPVDKITGPGNIYVALAKREVFGDV
DIDMIAGPSEIVVLADETAIPSEIAADLLSQAEHDKLSSCVFVTDSMALAETVSAEVNK
QLETLPRREIAEASVRDYGCIYVAETMVEAIETVNTLAPEHLEIITQSPEALLGSIKHA
GAIFLGRYSPEPVGDYFAGPNHVLPTNGTARFSSPLNVTDFQKKSSIISYSQSAFEEHA
ESIAAFARLEGLEAHARSIEARERRISK"
misc_recomb complement(2847..3225)
/label=N terminal part of lacA
/note="N terminal part of lacA"
primer_bind complement(3244..3260)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 3268..3284
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3292..3322)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3337..3358
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3638..4310)
/direction=LEFT
/label=ColE1
/note="ColE1"
rep_origin complement(3646..4234)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4405..5265)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/protein_id="AHG54606.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene complement(4405..5265)
/gene="bla"
/label=bla
promoter complement(5266..5370)
/gene="bla"
/label=AmpR promoter