LOCUS       Exported                6255 bp ds-DNA     circular SYN 17-DEC-2018
DEFINITION  Reporter vector pconaLUC, complete sequence.
ACCESSION   LT727453
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 6255)
  AUTHORS   De Schamphelaire W, Olbrechts A, Meert J, Verhelst K, Roggeman 
            Fonseca M, Vanhoucke M, Beyaert R.
  TITLE     BCCM/LMBP Plasmid collection
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6255)
  AUTHORS   De Schamphelaire W.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2017) BCCM/LMBP, Universiteit Gent, 
            Technologiepark 927, 9052, BELGIUM
REFERENCE   3  (bases 1 to 6255)
  AUTHORS   .
  TITLE     Direct Submission
FEATURES             Location/Qualifiers
     source          1..6255
                     /organism="Reporter vector pconaLUC"
                     /mol_type="other DNA"
                     /note="BCCM/LMBP Plasmid collection (Ghent 
                     University,Belgium) accession number LMBP 3248."
                     /db_xref="taxon:1945203"
     CDS             1..809
                     /codon_start=1
                     /note="unnamed protein product; part of SV40 VP1"
                     /protein_id="SJL88509.1"
                     /translation="FLCLI*MRT*PVEIF*CGKLLLLKLRLLG*LLC*TCIQGHKKLMK
                     MVLENPFKGQIFIFLLLVGNLWSCRVC*QTTGPNILLKL*PQKMLQLTVSR*TLTTRLF
                     WIRIMLIQWSAGFLIQVKMKTLDILEPTQVGKMCLLFCTLLTQQPQCFLMSRVLGPCAK
                     LTACMFLLLTFVGCLPTLLEHSSGRDFPDILKLPLESGL*KTPTQFPFC*VT*LTGGHR
                     GWMGSL*LECPLK*RRLGFMRTQRSFLGIQT**DTLMSLDKPQLECS"
     polyA_signal    750..884
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     regulatory      complement(810..906)
                     /regulatory_class="terminator"
                     /note="SV40 polyA early"
     regulatory      810..906
                     /regulatory_class="terminator"
                     /note="SV40 polyA late"
     misc_feature    complement(907..1597)
                     /label=part of 3 UTR of SV40 small t-antigen
                     /note="part of 3 UTR of SV40 small t-antigen"
     CDS             complement(1309..1329)
                     /codon_start=1
                     /product="nuclear localization signal of SV40 (simian virus
                     40) large T antigen"
                     /label=SV40 NLS
                     /translation="PKKKRKV"
     intron          1459..1524
                     /label=small t intron
                     /note="SV40 (simian virus 40) small t antigen intron"
     gap             1635..1705
                     /estimated_length=71
     misc_feature    complement(1706..1750)
                     /label=3 UTR of LUC
                     /note="3 UTR of LUC"
     CDS             complement(1751..3403)
                     /codon_start=1
                     /note="unnamed protein product; LUC"
                     /protein_id="SJL88510.1"
                     /translation="MEDAKNIKKGPAPFYPLEDGTAGEQLHKAMKRYALVPGTIAFTDA
                     HIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAP
                     ANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQS
                     MYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHA
                     RDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYK
                     IQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGY
                     GLTETTSAILITPEGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMS
                     GYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESIL
                     LQHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVDYVASQVTTAKKLRGGVV
                     FVDEVPKGLTGKLDARKIREILIKAKKGGKSKL"
     regulatory      complement(3538..3701)
                     /regulatory_class="promoter"
                     /note="CONA promoter"
     primer_bind     complement(4026..4042)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     protein_bind    4050..4066
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to 
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     regulatory      complement(4069..4152)
                     /regulatory_class="promoter"
                     /note="lac promoter"
     promoter        complement(4074..4104)
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    4119..4140
                     /label=CAP binding site
                     /bound_moiety="E. coli catabolite activator protein"
                     /note="CAP binding activates transcription in the presence 
                     of cAMP."
     rep_origin      complement(4244..4646)
                     /direction=LEFT
                     /label=pMB1 ori
                     /note="pMB1 ori"
     rep_origin      complement(4428..5016)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(5187..6047)
                     /codon_start=1
                     /note="unnamed protein product; ampicillin resistance"
                     /protein_id="SJL88511.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     promoter        complement(6048..6152)
                     /gene="bla"
                     /label=AmpR promoter