LOCUS       Exported                7999 bp ds-DNA     circular SYN 17-DEC-2018
DEFINITION  Staphylococcal shuttle vector pCN58, complete sequence.
ACCESSION   KR781472
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 7999)
  AUTHORS   Riojas MA, Bojja K, Byrd R, Hamid S, Mooney S, Monaco A, Alalade R, 
            King S, Hazbon MH.
  TITLE     Sequencing of a set of cassette-based shuttle vectors for 
            Gram-positive bacteria deposited at BEI resources from the NARSA 
            collection
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7999)
  AUTHORS   Riojas MA, Bojja K, Byrd R, Hamid S, Mooney S, Monaco A, Alalade R, 
            King S, Hazbon MH.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAY-2015) BEI Bacteriology, BEI Resources/American 
            Type and Culture Collection (ATCC), 10801 University Boulevard, 
            Manassas, VA 20110-2209, USA
REFERENCE   3  (bases 1 to 7999)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.0.2
            Coverage              :: 47381
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..7999
                     /organism="Staphylococcal shuttle vector pCN58"
                     /mol_type="other DNA"
                     /clone="NRS624"
                     /note="maintained in Escherichia coli grown in media 
                     supplemented with 100 ug/ml ampicillin"
                     /db_xref="taxon:1740138"
                     /culture_collection="BEI:NARSA NR-46159"
     misc_feature    1..2089
                     /note="pT181copwt repC; Staphylococcus replication 
                     cassette; derived from J04764"
     misc_feature    159..392
                     /label=RS-B site
                     /note="RS-B site"
     rep_origin      656..823
                     /note="ori; derived from Staphylococcus aureus"
     CDS             688..1632
                     /codon_start=1
                     /product="RepC protein"
                     /label=RepC protein
                     /note="polypeptide A"
                     /protein_id="AMR43704.1"
                     /translation="MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSF
                     DAMTIVGNLNRDNAQALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWD
                     RRNMRIEFNPNKLTRDEMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVK
                     KTIFYGRNGKPETKYFGVRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMV
                     DYWNDCFSDLHILQPDWKTIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISP
                     VDLTDLMKSTLKANEKQLQKQIDFWQHEFKFWK"
     variation       1132..1134
                     /label=E149D
                     /note="E149D"
     misc_feature    1794..2089
                     /label=truncated polypeptide B
                     /note="truncated polypeptide B"
     misc_feature    2101..3361
                     /note="pE194 ermC; erythromycin resistance; Staphylococcus 
                     selection cassette; derived from J01755"
     misc_feature    2408..2467
                     /label=leader peptide
                     /note="leader peptide"
     CDS             2527..3261
                     /codon_start=1
                     /gene="ermC"
                     /product="adenine methylase"
                     /label=ermC
                     /protein_id="AMR43705.1"
                     /translation="MNEKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFT
                     LELVKRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYKIYGNIPY
                     NISTDIIRKIVFDSIANEIYLIVEYGFAKRLLNTKRSLALLLMAEVDISILSMVPREYF
                     HPKPKVNSSLIRLSRKKSRISHKDKQKYNYFVMKWVNKEYKKIFTKNQFNNSLKHAGID
                     DLNNISFEQFLSLFNSYKLFNK"
     gene            2527..3261
                     /gene="ermC"
                     /label=ermC
     misc_feature    3378..5471
                     /note="amp ColE1 ori; Escherichia coli replication and 
                     selection cassette; derived from L09137"
     promoter        3626..3730
                     /gene="bla"
                     /label=AmpR promoter
     CDS             3731..4591
                     /codon_start=1
                     /product="beta lactamase"
                     /label=beta lactamase
                     /note="involved in ampicillin resistance"
                     /protein_id="AMR43703.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     rep_origin      4762..5350
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     rep_origin      complement(4966..5246)
                     /direction=LEFT
                     /note="ori; derived from Escherichia coli"
     misc_feature    5487..5531
                     /note="polylinker; derived from M13mp19"
     misc_feature    5543..7686
                     /note="luxAB; luciferase; derived from X06758"
     CDS             5565..6629
                     /codon_start=1
                     /gene="luxA"
                     /product="LuxA"
                     /label=luxA
                     /note="luciferase"
                     /protein_id="AMR43702.1"
                     /translation="MKFGNICFSYQPPGETHKQVMDRFVRLGIASEEVGFDTYWTLEHH
                     FTEFGLTGNLFVAAANLLGRTKTLNVGTMGVVIPTAHPVRQLEDVLLLDQMSKGRFNFG
                     TVRGLYHKDFRVFGVDMEESRAITQNFYQMIMESLQTGTISSDSDYIQFPKVDVYPKVY
                     SKNVPTCMTAESASTTEWLAIQGLPMVLSWIIGTNEKKAQMELYNEIATEYGHDISKID
                     HCMTYICSVDDDAQKAQDVCREFLKNWYDSYVNATNIFNDSNQTRGYDYHKGQWRDFVL
                     QGHTNTNRRVDYSNGINPVGTPEQCIEIIQRDIDATGITNITCGFEANGTEDEIIASMR
                     RFMTQVAPFLKEPK"
     gene            5565..6629
                     /gene="luxA"
                     /label=luxA
     CDS             6668..7648
                     /codon_start=1
                     /gene="luxB"
                     /product="LuxB"
                     /label=luxB
                     /note="luciferase"
                     /protein_id="AMR43701.1"
                     /translation="MKFGLFFLNFQKDGITSEETLDNMVKTVTLIDSTKYHFNTAFVNE
                     HHFSKNGIVGAPITAAGFLLGLTNKLHIGSLNQVITTHHPVRVAEEASLLDQMSEGRFI
                     LGFSDCESDFEMEFFRRHISSRQQQFEACYEIINDALTTGYCHPQNDFYDFPKVSINPH
                     CYSENGPKQYVSATSKEVVMWAAKKALPLTFKWEDNLETKERYAILYNKTAQQYGIDIS
                     DVDHQLTVIANLNADRSTAQEEVREYLKDYITETYPQMDRDEKINCIIEENAVGSHDDY
                     YESTKLAVEKTGSKNILLSFESMSDIKDVKDIIDMLNQKIEMNLP"
     gene            6668..7648
                     /gene="luxB"
                     /label=luxB
     misc_feature    7695..7995
                     /label=blaZTT
                     /note="blaZTT"
     misc_feature    7858..7995
                     /label=TT
                     /note="TT"