LOCUS       Exported                5426 bp ds-DNA     circular SYN 17-DEC-2018
DEFINITION  Staphylococcal shuttle vector pCN38, complete sequence.
ACCESSION   KR781477
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 5426)
  AUTHORS   Riojas MA, Bojja K, Byrd R, Hamid S, Mooney S, Monaco A, Alalade R, 
            King S, Hazbon MH.
  TITLE     Sequencing of a set of cassette-based shuttle vectors for 
            Gram-positive bacteria deposited at BEI resources from the NARSA 
            collection
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5426)
  AUTHORS   Riojas MA, Bojja K, Byrd R, Hamid S, Mooney S, Monaco A, Alalade R, 
            King S, Hazbon MH.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAY-2015) BEI Bacteriology, BEI Resources/American 
            Type and Culture Collection (ATCC), 10801 University Boulevard, 
            Manassas, VA 20110-2209, USA
REFERENCE   3  (bases 1 to 5426)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.0.2
            Coverage              :: 15854
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..5426
                     /organism="Staphylococcal shuttle vector pCN38"
                     /mol_type="other DNA"
                     /clone="NRS591"
                     /note="maintained in Staphylococcus aureus in media 
                     supplemented with 10 ug/ml chloramphenicol and 0.1M 
                     glycerol phosphate"
                     /db_xref="taxon:1740127"
                     /culture_collection="BEI:NARSA NR-46128"
     misc_feature    1..2089
                     /note="pT181copwt repC; Staphylococcus replication 
                     cassette; derived from J04764"
     misc_feature    159..392
                     /label=RS-B site
                     /note="RS-B site"
     rep_origin      656..823
                     /note="ori; derived from Staphylococcus aureus"
     CDS             688..1632
                     /codon_start=1
                     /product="RepC protein"
                     /label=RepC protein
                     /note="polypeptide A"
                     /protein_id="AMR43720.1"
                     /translation="MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSF
                     DAMTIVGNLNRDNAQALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWD
                     RRNMRIEFNPNKLTRDEMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVK
                     KTIFYGRNGKPETKYFGVRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMV
                     DYWNDCFSDLHILQPDWKTIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISP
                     VDLTDLMKSTLKANEKQLQKQIDFWQHEFKFWK"
     variation       1132..1134
                     /label=E149D
                     /note="E149D"
     misc_feature    1794..2089
                     /label=truncated polypeptide B
                     /note="truncated polypeptide B"
     misc_feature    2101..3097
                     /note="pC194 cat194; derived from NC002013"
     CDS             2372..3022
                     /codon_start=1
                     /product="cat"
                     /label=cat
                     /protein_id="AMR43721.1"
                     /translation="MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQE
                     GYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYWDKLEPLYTIFDGVSKTFSGIWTPV
                     KNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNSNYL
                     LPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPNDWLL"
     misc_feature    3114..5207
                     /note="amp ColE1 ori; Escherichia coli replication and 
                     selection cassette; derived from L09137"
     promoter        3362..3466
                     /gene="bla"
                     /label=AmpR promoter
     CDS             3467..4327
                     /codon_start=1
                     /product="beta lactamase"
                     /label=beta lactamase
                     /note="involved in ampicillin resistance"
                     /protein_id="AMR43722.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     rep_origin      4498..5086
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     rep_origin      complement(4702..4982)
                     /direction=LEFT
                     /note="ori; derived from Escherichia coli"
     misc_feature    5223..3
                     /label=MCS-pUC19
                     /note="MCS-pUC19"
     misc_feature    5223..5267
                     /note="polylinker; derived from M13mp19"
     misc_feature    5268..5425
                     /label=lac operon
                     /note="lac operon"
     primer_bind     complement(5268..5284)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"