LOCUS Exported 5329 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pCM51, complete sequence.
ACCESSION AF327713
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5329)
AUTHORS Marx CJ, Lidstrom ME.
TITLE Development of improved versatile broad-host-range vectors for use
in methylotrophs and other Gram-negative bacteria
JOURNAL Microbiology 147 (Pt 8), 2065-2075 (2001)
PUBMED 11495985
REFERENCE 2 (bases 1 to 5329)
AUTHORS Marx CJ, Lidstrom ME.
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) Microbiology, University of Washington, Box
357242, Seattle, WA 98195, USA
REFERENCE 3 (bases 1 to 5329)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5329
/organism="Cloning vector pCM51"
/mol_type="other DNA"
/note="minimal transferable and selectable IncP replicon
created from pDN19X, a spontaneous mutant of pDN19; served
as the IncP backbone for the construction of a series of
improved broad-host-range vectors"
/db_xref="taxon:163912"
rep_origin 4..712
/note="oriV; IncP origin of replication"
rep_origin 11..642
/label=oriV
/note="incP origin of replication"
CDS complement(1068..1718)
/codon_start=1
/gene="tetR"
/product="TetR"
/function="tetracycline resistance regulation"
/label=tetR
/protein_id="AAK73392.1"
/translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHF
RNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAGTR
PGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGGTVE
QAPLSPLLRAAIDAFDEAGPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD"
gene complement(1068..1718)
/gene="tetR"
/label=tetR
CDS 1824..3023
/codon_start=1
/gene="tetA"
/product="TetA"
/function="tetracycline resistance"
/label=tetA
/protein_id="AAK73393.1"
/translation="MKPNIPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHY
GILLALYALVQFACAPVLGALSDRFGRRPILLVSLAGATVDYAIMATAPFLWVLYIGRI
VAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAPF
FAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAVFFIM
QLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALM
LGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSL
AALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSGAGQRADR
"
gene 1824..3023
/gene="tetA"
/label=tetA
CDS complement(3254..4402)
/codon_start=1
/gene="trfA"
/product="TrfA"
/function="trans-acting replication"
/label=trfA
/protein_id="AAK73394.1"
/translation="MNRTFDRKAYRQELIDAGFSAEDAETIASRTVMRAPRETFQSVGS
MVQQATAKIERDSVQLAPPALPAPSAAVERSRRLEQEAAGLAKSMTIDTRGTMTTKKRK
TAGEDLAKQVSEAKQAALLKHTKQQIKEMQLSLFDIAPWPDTMRAMPNDTARSALFTTR
NKKIPREALQNKVIFHVNKDVKITYTGVELRADDDELVWQQVLEYAKRTPIGEPITFTF
YELCQDLGWSINGRYYTKAEECLSRLQATAMGFTSDRVGHLESVSLLHRFRVLDRGKKT
SRCQVLIDEEIVVLFAGDHYTKFIWEKYRKLSPTARRMFDYFSSHREPYPLKLETFRLM
CGSDSTRVKKWREQVGEACEELRGSGLVEHAWVNDDLVHCKR"
gene complement(3254..4402)
/gene="trfA"
/label=trfA
oriT 4584..5322
/label=IncP origin of transfer
/note="IncP origin of transfer"
CDS complement(4674..5045)
/codon_start=1
/gene="traJ"
/product="oriT-recognizing protein"
/label=traJ
/translation="MADETKPTRKGSPPIKVYCLPDERRAIEEKAAAAGMSL*AYLLAV
GQGYKITGVVDYEHVRELARINGDLGRLGGLLKLWLTDDPRTARFGDATILALLAKIEE
KQDELGKVMMGVVRPRAEP"
CDS complement(4929..5045)
/codon_start=1
/gene="traJ"
/product="TraJ"
/label=traJ
/note="truncated oriT-recognizing protein due to a G to T
transversion at nucleotide 7428 of pDN19X that changes a
TCG codon to TAG. This premature stop codon produces a
traJ allele that lacks the final 85 of its 123 amino
acids"
/protein_id="AAK73395.1"
/translation="MADETKPTRKGSPPIKVYCLPDERRAIEEKAAAAGMSL"
gene complement(4929..5045)
/gene="traJ"
/label=traJ
oriT 5078..5187
/note="incP origin of transfer"
LOCUS Exported 5329 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pCM51, complete sequence.
ACCESSION AF327713
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5329)
AUTHORS Marx CJ, Lidstrom ME.
TITLE Development of improved versatile broad-host-range vectors for use
in methylotrophs and other Gram-negative bacteria
JOURNAL Microbiology 147 (Pt 8), 2065-2075 (2001)
PUBMED 11495985
REFERENCE 2 (bases 1 to 5329)
AUTHORS Marx CJ, Lidstrom ME.
TITLE Direct Submission
JOURNAL Submitted (12-DEC-2000) Microbiology, University of Washington, Box
357242, Seattle, WA 98195, USA
REFERENCE 3 (bases 1 to 5329)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5329
/organism="Cloning vector pCM51"
/mol_type="other DNA"
/note="minimal transferable and selectable IncP replicon
created from pDN19X, a spontaneous mutant of pDN19; served
as the IncP backbone for the construction of a series of
improved broad-host-range vectors"
/db_xref="taxon:163912"
rep_origin 4..712
/note="oriV; IncP origin of replication"
rep_origin 11..642
/label=oriV
/note="incP origin of replication"
CDS complement(1068..1718)
/codon_start=1
/gene="tetR"
/product="TetR"
/function="tetracycline resistance regulation"
/label=tetR
/protein_id="AAK73392.1"
/translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHF
RNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAGTR
PGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGGTVE
QAPLSPLLRAAIDAFDEAGPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD"
gene complement(1068..1718)
/gene="tetR"
/label=tetR
CDS 1824..3023
/codon_start=1
/gene="tetA"
/product="TetA"
/function="tetracycline resistance"
/label=tetA
/protein_id="AAK73393.1"
/translation="MKPNIPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHY
GILLALYALVQFACAPVLGALSDRFGRRPILLVSLAGATVDYAIMATAPFLWVLYIGRI
VAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAPF
FAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAVFFIM
QLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALM
LGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSL
AALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSGAGQRADR
"
gene 1824..3023
/gene="tetA"
/label=tetA
CDS complement(3254..4402)
/codon_start=1
/gene="trfA"
/product="TrfA"
/function="trans-acting replication"
/label=trfA
/protein_id="AAK73394.1"
/translation="MNRTFDRKAYRQELIDAGFSAEDAETIASRTVMRAPRETFQSVGS
MVQQATAKIERDSVQLAPPALPAPSAAVERSRRLEQEAAGLAKSMTIDTRGTMTTKKRK
TAGEDLAKQVSEAKQAALLKHTKQQIKEMQLSLFDIAPWPDTMRAMPNDTARSALFTTR
NKKIPREALQNKVIFHVNKDVKITYTGVELRADDDELVWQQVLEYAKRTPIGEPITFTF
YELCQDLGWSINGRYYTKAEECLSRLQATAMGFTSDRVGHLESVSLLHRFRVLDRGKKT
SRCQVLIDEEIVVLFAGDHYTKFIWEKYRKLSPTARRMFDYFSSHREPYPLKLETFRLM
CGSDSTRVKKWREQVGEACEELRGSGLVEHAWVNDDLVHCKR"
gene complement(3254..4402)
/gene="trfA"
/label=trfA
oriT 4584..5322
/label=IncP origin of transfer
/note="IncP origin of transfer"
CDS complement(4674..5045)
/codon_start=1
/gene="traJ"
/product="oriT-recognizing protein"
/label=traJ
/translation="MADETKPTRKGSPPIKVYCLPDERRAIEEKAAAAGMSL*AYLLAV
GQGYKITGVVDYEHVRELARINGDLGRLGGLLKLWLTDDPRTARFGDATILALLAKIEE
KQDELGKVMMGVVRPRAEP"
CDS complement(4929..5045)
/codon_start=1
/gene="traJ"
/product="TraJ"
/label=traJ
/note="truncated oriT-recognizing protein due to a G to T
transversion at nucleotide 7428 of pDN19X that changes a
TCG codon to TAG. This premature stop codon produces a
traJ allele that lacks the final 85 of its 123 amino
acids"
/protein_id="AAK73395.1"
/translation="MADETKPTRKGSPPIKVYCLPDERRAIEEKAAAAGMSL"
gene complement(4929..5045)
/gene="traJ"
/label=traJ
oriT 5078..5187
/note="incP origin of transfer"