Wang G, Jones H, Doherty A, Yu X, Ma Y, Sun Y, Du W, Wang C, Xia L.
pCG185 载体载体图谱
pCG185 载体载体序列
LOCUS Exported 5508 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Gateway compatible binary vector pCG185, complete sequence.
ACCESSION KT163017
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5508)
AUTHORS Wang G, Jones H, Doherty A, Yu X, Ma Y, Sun Y, Du W, Wang C, Xia L.
TITLE Generation of marker- and backbone-free transgenic wheat plants via
Agrobacterium-mediated transformation based on the pCLEAN dual
binary vector system
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5508)
AUTHORS Wang G, Jones H, Doherty A, Yu X, Ma Y, Sun Y, Du W, Wang C, Xia L.
TITLE Direct Submission
JOURNAL Submitted (17-JUN-2015) Institute of Crop Sciences, Chinese Academy
of Agricultural Sciences, 12 Zhongguancun Street, Beijing, Beijing
100081, China
REFERENCE 3 (bases 1 to 5508)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5508
/organism="Gateway compatible binary vector pCG185"
/mol_type="other DNA"
/db_xref="taxon:1739642"
misc_feature 1..2481
/note="Cloning vector pGreenII0000 (INSD EF590266) based
backbone sequence"
rep_origin 1..720
/label=pUC-ori
/note="pUC-ori"
rep_origin complement(61..649)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(820..1635)
/codon_start=1
/gene="nptI"
/product="NptI"
/label=nptI
/note="kanamycin resistance"
/protein_id="ALK43906.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANVVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
gene complement(820..1635)
/gene="nptI"
/label=nptI
rep_origin 1921..2473
/label=pSa-ori
/note="pSa-ori"
rep_origin 1926..2361
/label=pSa ori
/note="origin of replication from bacterial plasmid pSa"
misc_feature 2508..2532
/note="T-DNA left border No. 1 sequence (Thole et al.,
(2007) Plant Physiol 145:1211-1219)"
misc_feature 2533..2558
/note="spacer sequence (Thole et al., (2007) Plant Physiol
145:1211-1219)"
misc_feature 2559..2583
/note="T-DNA left border No. 2 sequence (Thole et al.,
(2007) Plant Physiol 145:1211-1219)"
misc_recomb 2599..2723
/note="attR2; gateway recombination site; derived from
Escherichia coli"
protein_bind 2599..2723
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
CDS complement(2764..3069)
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/label=ccdB
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
CDS complement(2773..3069)
/codon_start=1
/gene="ccdB"
/product="CcdB"
/label=ccdB
/note="cell cycle death B; cytotoxic protein derived from
Escherichia coli"
/protein_id="ALK43907.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFW"
gene complement(2773..3069)
/gene="ccdB"
/label=ccdB
CDS complement(3411..4070)
/codon_start=1
/gene="cmR"
/product="CmR"
/label=cmR
/note="chloramphenicol resistance protein"
/protein_id="ALK43908.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene complement(3411..4070)
/gene="cmR"
/label=cmR
promoter complement(4124..4154)
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
misc_recomb 4179..4303
/note="attR1; gateway recombination site; derived from
Escherichia coli"
protein_bind complement(4179..4303)
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_feature 4351..4375
/note="T-DNA right border sequence (Thole et al., (2007)
Plant Physiol 145:1211-1219)"
misc_feature 4376..4399
/note="right border overdrive sequence (Thole et al.,
(2007) Plant Physiol 145:1211-1219)"
CDS 4609..5412
/codon_start=1
/gene="virGwt"
/product="VirGwt"
/label=virGwt
/note="wild-type virG"
/protein_id="ALK43909.1"
/translation="MIVHPSRENFSSAVNKGSDFRLKGEPLKHVLLVDDDVAMRHLIIE
YLTIHAFKVTAVADSTQFTRVLSSATVDVVVVDLNLGREDGLEIVRNLAAKSDIPIIII
SGDRLEETDKVVALELGASDFIAKPFSIREFLARIRVALRVRPNVVRSKDRRSFCFTDW
TLNLRQRRLMSEAGGEVKLTAGEFNLLLAFLEKPRDVLSREQLLIASRVRDEEVYDRSI
DVLILRLRRKLEADPSSPQLIKTARGAGYFFDADVQVSHGGTMAA"
gene 4609..5412
/gene="virGwt"
/label=virGwt
Wang G, Jones H, Doherty A, Yu X, Ma Y, Sun Y, Du W, Wang C, Xia L.
pCG185 载体载体图谱
pCG185 载体载体序列
LOCUS Exported 5508 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Gateway compatible binary vector pCG185, complete sequence.
ACCESSION KT163017
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5508)
AUTHORS Wang G, Jones H, Doherty A, Yu X, Ma Y, Sun Y, Du W, Wang C, Xia L.
TITLE Generation of marker- and backbone-free transgenic wheat plants via
Agrobacterium-mediated transformation based on the pCLEAN dual
binary vector system
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5508)
AUTHORS Wang G, Jones H, Doherty A, Yu X, Ma Y, Sun Y, Du W, Wang C, Xia L.
TITLE Direct Submission
JOURNAL Submitted (17-JUN-2015) Institute of Crop Sciences, Chinese Academy
of Agricultural Sciences, 12 Zhongguancun Street, Beijing, Beijing
100081, China
REFERENCE 3 (bases 1 to 5508)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5508
/organism="Gateway compatible binary vector pCG185"
/mol_type="other DNA"
/db_xref="taxon:1739642"
misc_feature 1..2481
/note="Cloning vector pGreenII0000 (INSD EF590266) based
backbone sequence"
rep_origin 1..720
/label=pUC-ori
/note="pUC-ori"
rep_origin complement(61..649)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(820..1635)
/codon_start=1
/gene="nptI"
/product="NptI"
/label=nptI
/note="kanamycin resistance"
/protein_id="ALK43906.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANVVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
gene complement(820..1635)
/gene="nptI"
/label=nptI
rep_origin 1921..2473
/label=pSa-ori
/note="pSa-ori"
rep_origin 1926..2361
/label=pSa ori
/note="origin of replication from bacterial plasmid pSa"
misc_feature 2508..2532
/note="T-DNA left border No. 1 sequence (Thole et al.,
(2007) Plant Physiol 145:1211-1219)"
misc_feature 2533..2558
/note="spacer sequence (Thole et al., (2007) Plant Physiol
145:1211-1219)"
misc_feature 2559..2583
/note="T-DNA left border No. 2 sequence (Thole et al.,
(2007) Plant Physiol 145:1211-1219)"
misc_recomb 2599..2723
/note="attR2; gateway recombination site; derived from
Escherichia coli"
protein_bind 2599..2723
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
CDS complement(2764..3069)
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/label=ccdB
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
CDS complement(2773..3069)
/codon_start=1
/gene="ccdB"
/product="CcdB"
/label=ccdB
/note="cell cycle death B; cytotoxic protein derived from
Escherichia coli"
/protein_id="ALK43907.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFW"
gene complement(2773..3069)
/gene="ccdB"
/label=ccdB
CDS complement(3411..4070)
/codon_start=1
/gene="cmR"
/product="CmR"
/label=cmR
/note="chloramphenicol resistance protein"
/protein_id="ALK43908.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene complement(3411..4070)
/gene="cmR"
/label=cmR
promoter complement(4124..4154)
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
misc_recomb 4179..4303
/note="attR1; gateway recombination site; derived from
Escherichia coli"
protein_bind complement(4179..4303)
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_feature 4351..4375
/note="T-DNA right border sequence (Thole et al., (2007)
Plant Physiol 145:1211-1219)"
misc_feature 4376..4399
/note="right border overdrive sequence (Thole et al.,
(2007) Plant Physiol 145:1211-1219)"
CDS 4609..5412
/codon_start=1
/gene="virGwt"
/product="VirGwt"
/label=virGwt
/note="wild-type virG"
/protein_id="ALK43909.1"
/translation="MIVHPSRENFSSAVNKGSDFRLKGEPLKHVLLVDDDVAMRHLIIE
YLTIHAFKVTAVADSTQFTRVLSSATVDVVVVDLNLGREDGLEIVRNLAAKSDIPIIII
SGDRLEETDKVVALELGASDFIAKPFSIREFLARIRVALRVRPNVVRSKDRRSFCFTDW
TLNLRQRRLMSEAGGEVKLTAGEFNLLLAFLEKPRDVLSREQLLIASRVRDEEVYDRSI
DVLILRLRRKLEADPSSPQLIKTARGAGYFFDADVQVSHGGTMAA"
gene 4609..5412
/gene="virGwt"
/label=virGwt