LOCUS Exported 5443 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pBlueLysis, complete sequence.
ACCESSION AY796342
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5443)
AUTHORS Yun J, Kang S, Ryu S.
TITLE Development of a novel vector system for programmed cell lysis in
Escherichia coli in response to glucose exhaustion
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5443)
AUTHORS Yun J, Kang S, Ryu S.
TITLE Direct Submission
JOURNAL Submitted (28-OCT-2004) School of Agricultural Biotechnology, Seoul
National Univ., 200-8105 CALS Seoul National Univ. Kwanak-gu, Seoul
151-742, South Korea
REFERENCE 3 (bases 1 to 5443)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5443
/organism="Cloning vector pBlueLysis"
/mol_type="other DNA"
/db_xref="taxon:303227"
protein_bind 143..164
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 179..209
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 217..233
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 241..257
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 253..576
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPSLHACRSTLEDLRVPSSNSLAVVLQRRDWENPGVTQLNR
LAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHRIWCTLSTICS
DAA"
CDS 259..576
/codon_start=1
/gene="lacZ"
/product="LacZ alpha fragment"
/label=lacZ
/note="alpha fragment beta-galactosidase; cloned from
pUC19; BamHI site was substituted with BglII"
/protein_id="AAV85010.1"
/translation="MITPSLHACRSTLEDLRVPSSNSLAVVLQRRDWENPGVTQLNRLA
AHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHRIWCTLSTICSDA
A"
gene 259..576
/gene="lacZ"
/label=lacZ
misc_feature 270..326
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(327..343)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(1008..1553)
/direction=LEFT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
promoter 1665..1693
/label=tet promoter
/note="E. coli promoter for tetracycline efflux protein
gene"
CDS 1741..2931
/codon_start=1
/gene="tet"
/product="tetracycline resistant protein"
/label=tet
/protein_id="AAV85011.1"
/translation="MKSNNALIVILGTVTLDAVGIGLVMPVLPGLLRDIVHSDSIASHY
GVLLALYALMQFLCAPVLGALSDRFGRRPVLLASLLGATIDYAIMATTPVLWILYAGRI
VAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAISLHAPF
LAAAVLNGLNLLLGCFLMQESHKGERRPMPLRAFNPVSSFRWARGMTIVAALMTVFFIM
QLVGQVPAALWVIFGEDRFRWSATMIGLSLAVFGILHALAQAFVTGPATKRFGEKQAII
AGMAADALGYVLLAFATRGWMAFPIMILLASGGIGMPALQAMLSRQVDDDHQGQLQGSL
AALTSLTSITGPLIVTAIYAASASTWNGLAWIVGAALYLVCLPALRRGAWSRATST"
gene 1741..2931
/gene="tet"
/label=tet
regulatory 3991..4170
/regulatory_class="promoter"
CDS 4171..4824
/codon_start=1
/gene="t"
/product="holin"
/label=t
/note="from T4 bacteriophage"
/protein_id="AAV85012.1"
/translation="MAPRISFSPSDILFGVLDRLFKDNATGKVLASRVAVVILLFIMAI
VWYRGDSFFEYYKQSKYETYSEIIEKERTARFESVALEQLQIVHISSEADFSAVYSFRP
KNLNYFVDIIAYEGKLPSTISEKSLGGYPVDKTMDEYTVHLNGRHYYSNSKFAFLPTKK
PTPEINYMYSCPYFNLDNIYAGTITMYWYRNDHISNDRLESICAQAARILGRAK"
gene 4171..4824
/gene="t"
/label=t
CDS 4834..4851
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
CDS 4958..5413
/codon_start=1
/gene="lys"
/product="lysozyme"
/label=lys
/note="from T7 bacteriophage"
/protein_id="AAV85013.1"
/translation="MARVQFKQRESTDAIFVHCSATKPSQNVGVREIRQWHKEQGWLDV
GYHFIIKRDGTVEAGRDEMAVGSHAKGYNHNSIGVCLVGGIDDKGKFDANFTPAQMQSL
RSLLVTLLAKYEGAGLRAHHEVAPKACPSFDLKRWWEKNELVTSDRG"
gene 4958..5413
/gene="lys"
/label=lys
promoter 5411..5443
/label=T7 Phi-3.8 promoter
/note="weak promoter for bacteriophage T7 RNA polymerase"
LOCUS Exported 5443 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pBlueLysis, complete sequence.
ACCESSION AY796342
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5443)
AUTHORS Yun J, Kang S, Ryu S.
TITLE Development of a novel vector system for programmed cell lysis in
Escherichia coli in response to glucose exhaustion
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5443)
AUTHORS Yun J, Kang S, Ryu S.
TITLE Direct Submission
JOURNAL Submitted (28-OCT-2004) School of Agricultural Biotechnology, Seoul
National Univ., 200-8105 CALS Seoul National Univ. Kwanak-gu, Seoul
151-742, South Korea
REFERENCE 3 (bases 1 to 5443)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5443
/organism="Cloning vector pBlueLysis"
/mol_type="other DNA"
/db_xref="taxon:303227"
protein_bind 143..164
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 179..209
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 217..233
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 241..257
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 253..576
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPSLHACRSTLEDLRVPSSNSLAVVLQRRDWENPGVTQLNR
LAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHRIWCTLSTICS
DAA"
CDS 259..576
/codon_start=1
/gene="lacZ"
/product="LacZ alpha fragment"
/label=lacZ
/note="alpha fragment beta-galactosidase; cloned from
pUC19; BamHI site was substituted with BglII"
/protein_id="AAV85010.1"
/translation="MITPSLHACRSTLEDLRVPSSNSLAVVLQRRDWENPGVTQLNRLA
AHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHRIWCTLSTICSDA
A"
gene 259..576
/gene="lacZ"
/label=lacZ
misc_feature 270..326
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(327..343)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(1008..1553)
/direction=LEFT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
promoter 1665..1693
/label=tet promoter
/note="E. coli promoter for tetracycline efflux protein
gene"
CDS 1741..2931
/codon_start=1
/gene="tet"
/product="tetracycline resistant protein"
/label=tet
/protein_id="AAV85011.1"
/translation="MKSNNALIVILGTVTLDAVGIGLVMPVLPGLLRDIVHSDSIASHY
GVLLALYALMQFLCAPVLGALSDRFGRRPVLLASLLGATIDYAIMATTPVLWILYAGRI
VAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAISLHAPF
LAAAVLNGLNLLLGCFLMQESHKGERRPMPLRAFNPVSSFRWARGMTIVAALMTVFFIM
QLVGQVPAALWVIFGEDRFRWSATMIGLSLAVFGILHALAQAFVTGPATKRFGEKQAII
AGMAADALGYVLLAFATRGWMAFPIMILLASGGIGMPALQAMLSRQVDDDHQGQLQGSL
AALTSLTSITGPLIVTAIYAASASTWNGLAWIVGAALYLVCLPALRRGAWSRATST"
gene 1741..2931
/gene="tet"
/label=tet
regulatory 3991..4170
/regulatory_class="promoter"
CDS 4171..4824
/codon_start=1
/gene="t"
/product="holin"
/label=t
/note="from T4 bacteriophage"
/protein_id="AAV85012.1"
/translation="MAPRISFSPSDILFGVLDRLFKDNATGKVLASRVAVVILLFIMAI
VWYRGDSFFEYYKQSKYETYSEIIEKERTARFESVALEQLQIVHISSEADFSAVYSFRP
KNLNYFVDIIAYEGKLPSTISEKSLGGYPVDKTMDEYTVHLNGRHYYSNSKFAFLPTKK
PTPEINYMYSCPYFNLDNIYAGTITMYWYRNDHISNDRLESICAQAARILGRAK"
gene 4171..4824
/gene="t"
/label=t
CDS 4834..4851
/codon_start=1
/product="6xHis affinity tag"
/label=6xHis
/translation="HHHHHH"
CDS 4958..5413
/codon_start=1
/gene="lys"
/product="lysozyme"
/label=lys
/note="from T7 bacteriophage"
/protein_id="AAV85013.1"
/translation="MARVQFKQRESTDAIFVHCSATKPSQNVGVREIRQWHKEQGWLDV
GYHFIIKRDGTVEAGRDEMAVGSHAKGYNHNSIGVCLVGGIDDKGKFDANFTPAQMQSL
RSLLVTLLAKYEGAGLRAHHEVAPKACPSFDLKRWWEKNELVTSDRG"
gene 4958..5413
/gene="lys"
/label=lys
promoter 5411..5443
/label=T7 Phi-3.8 promoter
/note="weak promoter for bacteriophage T7 RNA polymerase"