LOCUS Exported 4489 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Shuttle vector pBHK19MECA2, complete sequence.
ACCESSION AY219863
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4489)
AUTHORS Kirchner O, Tauch A.
TITLE Tools for genetic engineering in the amino acid-producing bacterium
Corynebacterium glutamicum
JOURNAL J. Biotechnol. 104 (1-3), 287-299 (2003)
PUBMED 12948646
REFERENCE 2 (bases 1 to 4489)
AUTHORS Kirchner O, Tauch A.
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2003) Department of Genetics, University of
Bielefeld, Universitaetsstrasse 25, Bielefeld D-33615, Germany
REFERENCE 3 (bases 1 to 4489)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4489
/organism="Shuttle vector pBHK19MECA2"
/mol_type="genomic DNA"
/note="Escherichia coli-Corynebacterium glutamicum shuttle
vector"
/db_xref="taxon:224632"
promoter 7..25
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
promoter complement(206..223)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(232..248)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 755..1549
/codon_start=1
/gene="aph(3)-IIa"
/product="Aph(3)-IIa"
/label=aph(3)-IIa
/note="aminoglycoside phosphotransferase"
/protein_id="AAO65233.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
gene 755..1549
/gene="aph(3)-IIa"
/label=aph(3)-IIa
oriT 1887..1996
/note="incP origin of transfer"
misc_feature 1934..2032
/label=RP4-mob region
/note="RP4-mob region"
CDS 2749..4200
/codon_start=1
/gene="repA"
/product="RepA"
/label=repA
/note="replication protein"
/protein_id="AAO65234.1"
/translation="MSLQTHAQNAHTKTPTRVERDRGGLDNTPASASDRDLLRDHLGRD
VLHGSVTRDFKKAYRRNADGTNSPRMYRFETDALGRCEYAMLTTKQYAAVLVVDVDQVG
TAGGDPADLNPYVRDVVRSLITHSVGPAWVGINPTNGKAQFIWLIDPVYADRNGKSAQM
KLLAATTRVLGELLDHDPHFSHRFSRNPFYTGKAPTAYRWYRQHNRVMRLGDLIKQVRD
MAGHDQFNPTPRQQFSSGRELINAVKTRREEAQAFKALAQDVDAEIAGGLDQYDPELID
GVRVLWIVQGTAARDETAFRHALKTGHRLRQQGQRLTDAAIIDAYEHAYNVAHTHGGAG
RDNEMPPMRDRQTMARRVRGYVAQSKSETYSGSNAPGKATSSERKALATMGRRGGQKAA
QRWKTDPEGKYAQAQRSKLEKTHRKKKAQGRSTKSRISQMVNDQYFQTGTVPTWAEIGA
EVGVSRATVARHVAELKKSGDYPDV"
gene 2749..4200
/gene="repA"
/label=repA
protein_bind 4363..4384
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 4399..4429
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4437..4453
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 4461..4477
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 4473..442
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPSFNTTHYREMLTAVPRPAASHLNACCSPGDVDCLNEALI
KGPIGHVRLDLARLEDPWYRCGRTSDRYLPLVRVNVNSLAVVLQRRDWENPGVTQLNRL
AAHPPFASWRNSEEARTDRPSQQLRSLNGEWRDKLASRCRKHSGRKGC"
LOCUS Exported 4489 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Shuttle vector pBHK19MECA2, complete sequence.
ACCESSION AY219863
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4489)
AUTHORS Kirchner O, Tauch A.
TITLE Tools for genetic engineering in the amino acid-producing bacterium
Corynebacterium glutamicum
JOURNAL J. Biotechnol. 104 (1-3), 287-299 (2003)
PUBMED 12948646
REFERENCE 2 (bases 1 to 4489)
AUTHORS Kirchner O, Tauch A.
TITLE Direct Submission
JOURNAL Submitted (15-JAN-2003) Department of Genetics, University of
Bielefeld, Universitaetsstrasse 25, Bielefeld D-33615, Germany
REFERENCE 3 (bases 1 to 4489)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4489
/organism="Shuttle vector pBHK19MECA2"
/mol_type="genomic DNA"
/note="Escherichia coli-Corynebacterium glutamicum shuttle
vector"
/db_xref="taxon:224632"
promoter 7..25
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
promoter complement(206..223)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(232..248)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 755..1549
/codon_start=1
/gene="aph(3)-IIa"
/product="Aph(3)-IIa"
/label=aph(3)-IIa
/note="aminoglycoside phosphotransferase"
/protein_id="AAO65233.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
gene 755..1549
/gene="aph(3)-IIa"
/label=aph(3)-IIa
oriT 1887..1996
/note="incP origin of transfer"
misc_feature 1934..2032
/label=RP4-mob region
/note="RP4-mob region"
CDS 2749..4200
/codon_start=1
/gene="repA"
/product="RepA"
/label=repA
/note="replication protein"
/protein_id="AAO65234.1"
/translation="MSLQTHAQNAHTKTPTRVERDRGGLDNTPASASDRDLLRDHLGRD
VLHGSVTRDFKKAYRRNADGTNSPRMYRFETDALGRCEYAMLTTKQYAAVLVVDVDQVG
TAGGDPADLNPYVRDVVRSLITHSVGPAWVGINPTNGKAQFIWLIDPVYADRNGKSAQM
KLLAATTRVLGELLDHDPHFSHRFSRNPFYTGKAPTAYRWYRQHNRVMRLGDLIKQVRD
MAGHDQFNPTPRQQFSSGRELINAVKTRREEAQAFKALAQDVDAEIAGGLDQYDPELID
GVRVLWIVQGTAARDETAFRHALKTGHRLRQQGQRLTDAAIIDAYEHAYNVAHTHGGAG
RDNEMPPMRDRQTMARRVRGYVAQSKSETYSGSNAPGKATSSERKALATMGRRGGQKAA
QRWKTDPEGKYAQAQRSKLEKTHRKKKAQGRSTKSRISQMVNDQYFQTGTVPTWAEIGA
EVGVSRATVARHVAELKKSGDYPDV"
gene 2749..4200
/gene="repA"
/label=repA
protein_bind 4363..4384
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 4399..4429
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 4437..4453
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 4461..4477
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 4473..442
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/label=lacZ-alpha
/translation="MTMITPSFNTTHYREMLTAVPRPAASHLNACCSPGDVDCLNEALI
KGPIGHVRLDLARLEDPWYRCGRTSDRYLPLVRVNVNSLAVVLQRRDWENPGVTQLNRL
AAHPPFASWRNSEEARTDRPSQQLRSLNGEWRDKLASRCRKHSGRKGC"