LOCUS Exported 3856 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Integration vector pBGSC6, complete sequence.
ACCESSION DQ483056
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3856)
AUTHORS Zeigler DR.
TITLE Sequence of pBGSC6, a simple integration vector for Gram-positive
bacteria
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3856)
AUTHORS Zeigler DR.
TITLE Direct Submission
JOURNAL Submitted (06-APR-2006) Bacillus Genetic Stock Center, The Ohio
State University, 484 W. 12th Ave., Columbus, OH 43210, USA
REFERENCE 3 (bases 1 to 3856)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3856
/organism="Integration vector pBGSC6"
/lab_host="Escherichia coli"
/mol_type="other DNA"
/db_xref="taxon:382375"
protein_bind 106..127
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 142..172
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 180..196
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 204..220
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 216..539
/codon_start=1
/gene="lacZ"
/product="beta-galactosidase alpha fragment"
/label=lacZ
/note="alpha complementation for beta galactosidase"
/protein_id="ABF20539.1"
/translation="MTMITPSLHACRSTLEDPRVPSSNSLAVVLQRRDWENPGVTQLNR
LAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHRIWCTLSTICS
DAA"
gene 216..539
/gene="lacZ"
/label=lacZ
misc_feature 233..289
/gene="lacZ"
/label=pUC19 multiple cloning site
/note="pUC19 multiple cloning site"
primer_bind complement(290..306)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 951..1601
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/note="chloramphenicol resistance"
/protein_id="ABF20538.1"
/translation="MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQE
GYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYWDKLEPLYTIFDGVSKTFSGIWTPV
KNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNSNYL
LPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPNDWLL"
gene 951..1601
/gene="cat"
/label=cat
CDS 2055..2915
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin resistance"
/protein_id="ABF20537.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 2055..2915
/gene="bla"
/label=bla
rep_origin 3086..3674
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
LOCUS Exported 3856 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Integration vector pBGSC6, complete sequence.
ACCESSION DQ483056
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3856)
AUTHORS Zeigler DR.
TITLE Sequence of pBGSC6, a simple integration vector for Gram-positive
bacteria
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3856)
AUTHORS Zeigler DR.
TITLE Direct Submission
JOURNAL Submitted (06-APR-2006) Bacillus Genetic Stock Center, The Ohio
State University, 484 W. 12th Ave., Columbus, OH 43210, USA
REFERENCE 3 (bases 1 to 3856)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3856
/organism="Integration vector pBGSC6"
/lab_host="Escherichia coli"
/mol_type="other DNA"
/db_xref="taxon:382375"
protein_bind 106..127
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 142..172
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 180..196
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 204..220
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 216..539
/codon_start=1
/gene="lacZ"
/product="beta-galactosidase alpha fragment"
/label=lacZ
/note="alpha complementation for beta galactosidase"
/protein_id="ABF20539.1"
/translation="MTMITPSLHACRSTLEDPRVPSSNSLAVVLQRRDWENPGVTQLNR
LAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHRIWCTLSTICS
DAA"
gene 216..539
/gene="lacZ"
/label=lacZ
misc_feature 233..289
/gene="lacZ"
/label=pUC19 multiple cloning site
/note="pUC19 multiple cloning site"
primer_bind complement(290..306)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 951..1601
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/note="chloramphenicol resistance"
/protein_id="ABF20538.1"
/translation="MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQE
GYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYWDKLEPLYTIFDGVSKTFSGIWTPV
KNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNSNYL
LPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPNDWLL"
gene 951..1601
/gene="cat"
/label=cat
CDS 2055..2915
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin resistance"
/protein_id="ABF20537.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 2055..2915
/gene="bla"
/label=bla
rep_origin 3086..3674
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"