Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
pBBR1TaC 载体载体图谱
pBBR1TaC 载体载体序列
LOCUS Exported 4674 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pBBR1TaC, complete sequence.
ACCESSION MH651718
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4674)
AUTHORS Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
TITLE Repurposing type III polyketide synthase as a malonyl-CoA biosensor
for metabolic engineering in bacteria
JOURNAL Proc. Natl. Acad. Sci. U.S.A. (2018) In press
PUBMED 30232266
REFERENCE 2 (bases 1 to 4674)
AUTHORS Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
TITLE Novel Enzyme-coupled Malonyl-CoA Biosensor based on Type III
Polyketide Synthase and Use of the same (KR 10-2018-0066323)
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4674)
AUTHORS Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2018) Dept. Chemical and Biomolecular Engineering,
Korea Advanced Institute of Science and Technology, Daehak-ro 291,
Daejeon 34141, South Korea
REFERENCE 4 (bases 1 to 4674)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4674
/organism="Cloning vector pBBR1TaC"
/mol_type="other DNA"
/db_xref="taxon:2364891"
regulatory 2..30
/regulatory_class="promoter"
/note="Tac promoter"
promoter 2..30
/label=tac promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
protein_bind 38..54
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
regulatory 125..535
/regulatory_class="terminator"
/note="rrnBT1T2"
terminator 330..416
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 508..535
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
protein_bind 556..577
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
CDS complement(634..1323)
/codon_start=1
/gene="cat"
/product="chloramphenicol resistance protein"
/label=cat
/protein_id="AYD60181.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQFLCMRPIRKPPL
PARWPIH"
gene complement(634..1323)
/gene="cat"
/label=cat
promoter complement(1324..1426)
/label=cat promoter
/note="promoter of the E. coli cat gene encoding
chloramphenicol acetyltransferase"
CDS complement(1576..2595)
/codon_start=1
/gene="mob"
/product="Mob"
/function="required for plasmid mobilization"
/label=mob
/protein_id="AYD60182.1"
/translation="MAAYAIMRCKKLAKMGNVAASLKHAYRERETPNADASRTPENEHW
AASSTDEAMGRLRELLPEKRRKDAVLAVEYVMTASPEWWKSASQEQQAAFFEKAHKWLA
DKYGADRIVTASIHRDETSPHMTAFVVPLTQDGRLSAKEFIGNKAQMTRDQTTFAAAVA
DLGLQRGIEGSKARHTRIQAFYEALERPPVGHVTISPQAVEPRAYAPQGLAEKLGISKR
VETPEAVADRLTKAVRQGYEPALQAAAGAREMRKKADQAQETARDLRERLKPVLDALGP
LNRDMQAKAAAIIKAVGEKLLTEQREVQRQKQAQRQQERGRAHFPEKCHLTSKKPLLS"
gene complement(1576..2595)
/gene="mob"
/label=mob
rep_origin 2819..3590
/label=pBBR1 oriV
/note="replication origin of the broad-host-range plasmid
pBBR1 from Bordetella bronchiseptica; requires the pBBR1
Rep protein for replication"
CDS 3591..4253
/codon_start=1
/gene="rep"
/product="Rep"
/function="required for plasmid replication"
/label=rep
/protein_id="AYD60183.1"
/translation="MATQSREIGIQAKNKPGHWVQTERKAHEAWAGLIARKPTAAMLLH
HLVAQMGHQNAVVVSQKTLSKLIGRSLRTVQYAVKDLVAERWISVVKLNGPGTVSAYVV
NDRVAWGQPRDQLRLSVFSAAVVVDHDDQDESLLGHGDLRRIPTLYPGEQQLPTGPGEE
PPSQPGIPGMEPDLPALTETEEWERRGQQRLPMPDEPCFLDDGEPLEPPTRVTLPRR"
gene 3591..4253
/gene="rep"
/label=rep
Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
pBBR1TaC 载体载体图谱
pBBR1TaC 载体载体序列
LOCUS Exported 4674 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pBBR1TaC, complete sequence.
ACCESSION MH651718
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4674)
AUTHORS Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
TITLE Repurposing type III polyketide synthase as a malonyl-CoA biosensor
for metabolic engineering in bacteria
JOURNAL Proc. Natl. Acad. Sci. U.S.A. (2018) In press
PUBMED 30232266
REFERENCE 2 (bases 1 to 4674)
AUTHORS Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
TITLE Novel Enzyme-coupled Malonyl-CoA Biosensor based on Type III
Polyketide Synthase and Use of the same (KR 10-2018-0066323)
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4674)
AUTHORS Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2018) Dept. Chemical and Biomolecular Engineering,
Korea Advanced Institute of Science and Technology, Daehak-ro 291,
Daejeon 34141, South Korea
REFERENCE 4 (bases 1 to 4674)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4674
/organism="Cloning vector pBBR1TaC"
/mol_type="other DNA"
/db_xref="taxon:2364891"
regulatory 2..30
/regulatory_class="promoter"
/note="Tac promoter"
promoter 2..30
/label=tac promoter
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
protein_bind 38..54
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
regulatory 125..535
/regulatory_class="terminator"
/note="rrnBT1T2"
terminator 330..416
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 508..535
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
protein_bind 556..577
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
CDS complement(634..1323)
/codon_start=1
/gene="cat"
/product="chloramphenicol resistance protein"
/label=cat
/protein_id="AYD60181.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQFLCMRPIRKPPL
PARWPIH"
gene complement(634..1323)
/gene="cat"
/label=cat
promoter complement(1324..1426)
/label=cat promoter
/note="promoter of the E. coli cat gene encoding
chloramphenicol acetyltransferase"
CDS complement(1576..2595)
/codon_start=1
/gene="mob"
/product="Mob"
/function="required for plasmid mobilization"
/label=mob
/protein_id="AYD60182.1"
/translation="MAAYAIMRCKKLAKMGNVAASLKHAYRERETPNADASRTPENEHW
AASSTDEAMGRLRELLPEKRRKDAVLAVEYVMTASPEWWKSASQEQQAAFFEKAHKWLA
DKYGADRIVTASIHRDETSPHMTAFVVPLTQDGRLSAKEFIGNKAQMTRDQTTFAAAVA
DLGLQRGIEGSKARHTRIQAFYEALERPPVGHVTISPQAVEPRAYAPQGLAEKLGISKR
VETPEAVADRLTKAVRQGYEPALQAAAGAREMRKKADQAQETARDLRERLKPVLDALGP
LNRDMQAKAAAIIKAVGEKLLTEQREVQRQKQAQRQQERGRAHFPEKCHLTSKKPLLS"
gene complement(1576..2595)
/gene="mob"
/label=mob
rep_origin 2819..3590
/label=pBBR1 oriV
/note="replication origin of the broad-host-range plasmid
pBBR1 from Bordetella bronchiseptica; requires the pBBR1
Rep protein for replication"
CDS 3591..4253
/codon_start=1
/gene="rep"
/product="Rep"
/function="required for plasmid replication"
/label=rep
/protein_id="AYD60183.1"
/translation="MATQSREIGIQAKNKPGHWVQTERKAHEAWAGLIARKPTAAMLLH
HLVAQMGHQNAVVVSQKTLSKLIGRSLRTVQYAVKDLVAERWISVVKLNGPGTVSAYVV
NDRVAWGQPRDQLRLSVFSAAVVVDHDDQDESLLGHGDLRRIPTLYPGEQQLPTGPGEE
PPSQPGIPGMEPDLPALTETEEWERRGQQRLPMPDEPCFLDDGEPLEPPTRVTLPRR"
gene 3591..4253
/gene="rep"
/label=rep