LOCUS       Exported                4546 bp ds-DNA     circular SYN 17-DEC-2018
DEFINITION  Cloning vector pBAMD1-6, complete sequence.
ACCESSION   KM403115
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 4546)
  AUTHORS   Martinez-Garcia E, Aparicio T, de Lorenzo V, Nikel PI.
  TITLE     New transposon tools tailored for metabolic engineering of 
            gram-negative microbial cell factories
  JOURNAL   Front Bioeng Biotechnol 2, 46 (2014)
  PUBMED    25389526
REFERENCE   2  (bases 1 to 4546)
  AUTHORS   Martinez-Garcia E, Aparicio T, de Lorenzo V, Nikel PI.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-AUG-2014) Systems Biology Program, Centro Nacional de 
            Biotecnologia (CNB-CSIC), C/Darwin 3, Madrid, Madrid 28049, Spain
REFERENCE   3  (bases 1 to 4546)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing 
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..4546
                     /organism="Cloning vector pBAMD1-6"
                     /mol_type="other DNA"
                     /db_xref="taxon:1572692"
     misc_feature    10..28
                     /label=mosaic element I (ME-I)
                     /note="mosaic element I (ME-I)"
     misc_feature    62..118
                     /label=MCS
                     /note="pUC18/19 multiple cloning site"
     regulatory      127..156
                     /regulatory_class="terminator"
                     /note="terminator T500"
     promoter        165..193
                     /gene="intI1 (promoter lies within the coding sequence)"
                     /label=Pc promoter
                     /note="class 1 integron promoter"
     CDS             382..915
                     /codon_start=1
                     /gene="aacC1"
                     /product="AacC1"
                     /label=aacC1
                     /note="gentamycin 3-N-acetyltransferase; gentamycin 
                     resistance"
                     /protein_id="AIX94018.1"
                     /translation="MLRSSNDVTQQGSRPKTKLGGSSMGIIRTCRLGPDQVKSMRAALD
                     LFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRS
                     EIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGIR
                     EEVMHFDIDPSTAT"
     gene            382..915
                     /gene="aacC1"
                     /label=aacC1
     regulatory      980..1051
                     /regulatory_class="terminator"
                     /note="terminator of gene 32 (T32)"
     misc_feature    1062..1080
                     /label=mosaic element O (ME-O)
                     /note="mosaic element O (ME-O)"
     regulatory      1087..1189
                     /regulatory_class="terminator"
                     /note="terminator T0"
     terminator      1091..1185
                     /label=lambda t0 terminator
                     /note="transcription terminator from phage lambda"
     CDS             1290..2720
                     /codon_start=1
                     /gene="tnpA"
                     /product="TnpA"
                     /label=tnpA
                     /note="Tn5 transposase"
                     /protein_id="AIX94019.1"
                     /translation="MITSALHRAADWAKSVFSSAALGDPRRTARLVNVAAQLAKYSGKS
                     ITISSEGSKAMQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQEFPELLAIEDTTSLSYR
                     HQVAEELGKLGSIQDKSRGWWVHSVLLLEATTFRTVGLLHQEWWMRPDDPADADEKESG
                     KWLAAAATSRLRMGSMMSNVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRKDVESGL
                     YLYDHLKNQPELGGYQISIPQKGVVDKRGKRKNRPARKASLSLRSGRITLKQGNITLNA
                     VLAEEINPPKGETPLKWLLLTSEPVESLAQALRVIDIYTHRWRIEEFHKAWKTGAGAER
                     QRMEEPDNLERMVSILSFVAVRLLQLRESFTPPQALRAQGLLKEAEHVESQSAETVLTP
                     DECQLLGYLDKGKRKRKEKAGSLQWAYMAIARLGGFMDSKRTGIASWGALWEGWEALQS
                     KLDGFLAAKDLMAQGIKI"
     gene            1290..2720
                     /gene="tnpA"
                     /label=tnpA
     CDS             1290..2717
                     /codon_start=1
                     /product="transposase from the bacterial Tn5 transposon 
                     (Reznikoff, 1993)"
                     /label=Tn5 transposase
                     /translation="MITSALHRAADWAKSVFSSAALGDPRRTARLVNVAAQLAKYSGKS
                     ITISSEGSKAMQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQEFPELLAIEDTTSLSYR
                     HQVAEELGKLGSIQDKSRGWWVHSVLLLEATTFRTVGLLHQEWWMRPDDPADADEKESG
                     KWLAAAATSRLRMGSMMSNVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRKDVESGL
                     YLYDHLKNQPELGGYQISIPQKGVVDKRGKRKNRPARKASLSLRSGRITLKQGNITLNA
                     VLAEEINPPKGETPLKWLLLTSEPVESLAQALRVIDIYTHRWRIEEFHKAWKTGAGAER
                     QRMEEPDNLERMVSILSFVAVRLLQLRESFTPPQALRAQGLLKEAEHVESQSAETVLTP
                     DECQLLGYLDKGKRKRKEKAGSLQWAYMAIARLGGFMDSKRTGIASWGALWEGWEALQS
                     KLDGFLAAKDLMAQGIKI"
     promoter        2774..2865
                     /gene="bla"
                     /label=AmpR promoter
     CDS             2866..3726
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=bla
                     /protein_id="AIX94020.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     gene            2866..3726
                     /gene="bla"
                     /label=bla
     terminator      3730..3769
                     /label=fd terminator
                     /note="central terminator from bacteriophage fd (Otsuka and
                     Kunisawa, 1982)"
     misc_feature    complement(3782..4027)
                     /label=oriT
                     /note="oriT"
     oriT            3917..4025
                     /note="incP origin of transfer"
     misc_feature    complement(4036..4427)
                     /label=oriR6K
                     /note="oriR6K"
     rep_origin      4036..4424
                     /label=R6K gamma ori
                     /note="gamma replication origin from E. coli plasmid R6K; 
                     requires the R6K initiator protein pi for replication"
     regulatory      complement(4442..4546)
                     /regulatory_class="terminator"
                     /note="terminator T1"
     terminator      4455..4541
                     /gene="Escherichia coli rrnB"
                     /label=rrnB T1 terminator
                     /note="transcription terminator T1 from the E. coli rrnB 
                     gene"