| 载体基本信息 |
| 载体名称 |
pB7WG_ASX |
载体抗性 |
Spectinomycin/Streptomycin |
| 载体长度 |
8729 bp |
载体类型 |
Binary vector |
| 载体来源 |
Lukan T, Machens F, Coll A, Baebler S, Messerschmidt K, Gruden K. |
pB7WG_ASX 载体载体图谱
pB7WG_ASX 载体载体序列
LOCUS Exported 8729 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Binary vector pB7WG_ASX, complete sequence.
ACCESSION MG561373
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8729)
AUTHORS Lukan T, Machens F, Coll A, Baebler S, Messerschmidt K, Gruden K.
TITLE Plant X-tender: An extension of the AssemblX system for the assembly
and expression of multigene constructs in plants
JOURNAL PLoS ONE 13 (1), e0190526 (2018)
PUBMED 29300787
REFERENCE 2 (bases 1 to 8729)
AUTHORS Lukan T, Machens F, Coll A, Baebler S, Messerschmidt K, Gruden K.
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2017) Department of Biotechnology and Systems
Biology, National Institute of Biology, Vecna pot 111, Ljubljana
1000, Slovenia
REFERENCE 3 (bases 1 to 8729)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..8729
/organism="Binary vector pB7WG_ASX"
/mol_type="other DNA"
/db_xref="taxon:2070778"
misc_feature join(1..115,8645..8729)
/label=Right T-DNA border, RB
/note="Right T-DNA border, RB"
misc_feature join(1..7814,8645..8729)
/label=pB7WG backbone
/note="pB7WG backbone"
CDS 1331..1960
/codon_start=1
/product="stability protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
/label=pVS1 StaA
/translation="MKVIAVLNQKGGSGKTTIATHLARALQLAGADVLLVDSDPQGSAR
DWAAVREDQPLTVVGIDRPTIDRDVKAIGRRDFVVIDGAPQAADLAVSAIKAADFVLIP
VQPSPYDIWATADLVELVKQRIEVTDGRLQAAFVVSRAIKGTRIGGEVAEALAGYELPI
LESRITQRVSYPGTAAAGTTVLESEPEGDAAREVQALAAEIKSKLI"
CDS 2394..3461
/codon_start=1
/product="replication protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
/label=pVS1 RepA
/translation="GRKPSGPVQIGAALGDDLVEKLKAAQAAQRQRIEAEARPGESWQA
AADRIRKESRQPPAAGAPSIRKPPKGDEQPDFFVPMLYDVGTRDSRSIMDVAVFRLSKR
DRRAGEVIRYELPDGHVEVSAGPAGMASVWDYDLVLMAVSHLTESMNRYREGKGDKPGR
VFRPHVADVLKFCRRADGGKQKDDLVETCIRLNTTHVAMQRTKKAKNGRLVTVSEGEAL
ISRYKIVKSETGRPEYIEIELADWMYREITEGKNPDVLTVHPDYFLIDPGIGRFLYRLA
RRAAGKAEARWLFKTIYERSGSAGEFKKFCFTVRKLIGSNDLPEYDLKEEAGQAGPILV
MRYRNLIEGEASAGS"
rep_origin 3527..3721
/label=pVS1 oriV
/note="origin of replication for the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
misc_feature 4065..4205
/label=bom
/note="basis of mobility region from pBR322"
rep_origin complement(4391..4979)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature complement(5049..6298)
/label=Spectinomycin resistance cassette
/note="Spectinomycin resistance cassette"
CDS complement(5223..6155)
/codon_start=1
/gene="specR"
/product="SpecR"
/label=specR
/note="Spectinomycin resistance"
/protein_id="AUO29336.1"
/translation="MTCFFGVQSMPRASKQQARYAVGRCLMLWSSNDVTQQGSRPKTKL
NIMGEAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVR
LDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRND
ILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNS
PPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQ
EEDRLASRADQLEEFVHYVKGEITKVVGK"
gene complement(5223..6155)
/gene="specR"
/label=specR
CDS complement(5223..6014)
/codon_start=1
/gene="aadA"
/product="aminoglycoside adenylyltransferase (Murphy,
1985)"
/label=SmR
/note="confers resistance to spectinomycin and
streptomycin"
/translation="MGEAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
misc_feature 6304..6636
/label=Left T-DNA border, LB
/note="Left T-DNA border, LB"
misc_feature 6542..6566
/label=LB T-DNA repeat
/note="left border repeat from nopaline C58 T-DNA"
misc_feature complement(6640..7775)
/label=Glufosinate-ammonium (Basta) resistance cassette
/note="Glufosinate-ammonium (Basta) resistance cassette"
terminator 6659..6914
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
CDS complement(6934..7485)
/codon_start=1
/gene="bar"
/product="Bar"
/label=bar
/note="Glufosinate-ammonium (Basta) resistance"
/protein_id="AUO29337.1"
/translation="MSPERRPADIRRATEADMPAVCTIVNHYIETSTVNFRTEPQEPQE
WTDDLVRLRERYPWLVAEVDGEVAGIAYAGPWKARNAYDWTAESTVYVSPRHQRTGLGS
TLYTHLLKSLEAQGFKSVVAVIGLPNDPSVRMHEALGYAPRGMLRAAGFKHGNWHDVGF
WQLDFSLPVPPRPVLPVTEI"
gene complement(6934..7485)
/gene="bar"
/label=bar
promoter complement(7527..7706)
/label=NOS promoter
/note="nopaline synthase promoter"
misc_feature 7815..7832
/label=I-SceI restriction site
/note="I-SceI restriction site"
misc_feature 7851..7900
/label=homology region A0
/note="homology region A0"
misc_feature 7901..7906
/label=HindIII restriction site
/note="HindIII restriction site"
misc_feature 7907..8569
/label=ccdB cassette
/note="ccdB cassette"
CDS 8236..8541
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/label=ccdB
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VPRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
misc_feature 8570..8575
/label=HindIII restriction site
/note="HindIII restriction site"
misc_feature 8576..8625
/label=homology region B0
/note="homology region B0"
misc_feature complement(8626..8643)
/label=I-SceI restriction site
/note="I-SceI restriction site"
misc_feature 8706..1
/label=RB T-DNA repeat
/note="right border repeat from nopaline C58 T-DNA"