| 载体基本信息 |
| 载体名称 |
pB4nRGW |
载体抗性 |
Spectinomycin/Streptomycin |
| 载体长度 |
12201 bp |
载体类型 |
Gateway vector |
| 载体来源 |
Kamigaki A, Nito K, Hikino K, Goto-Yamada S, Nishimura M, Nakagawa T, Mano S. |
pB4nRGW 载体载体图谱
pB4nRGW 载体载体序列
LOCUS Exported 12201 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Gateway vector pB4nRGW DNA, complete sequence.
ACCESSION AB830551
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 12201)
AUTHORS Kamigaki A, Nito K, Hikino K, Goto-Yamada S, Nishimura M, Nakagawa
T, Mano S.
TITLE Gateway Vectors for Simultaneous Detection of Multiple
Protein-Protein Interactions in Plant Cells Using Bimolecular
Fluorescence Complementation
JOURNAL PLoS ONE 11 (8), E0160717 (2016)
PUBMED 27490375
REFERENCE 2 (bases 1 to 12201)
AUTHORS Mano S, Nakagawa T.
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2013) Contact:Shoji Mano National Institute for
Basic Biology, Department of Cell Biology; 38 Nishigonaka, Myodaiji,
Okazaki, Aichi 444-8585, Japan
REFERENCE 3 (bases 1 to 12201)
AUTHORS .
TITLE Direct Submission
COMMENT These colnes were obtained at our laboratory.
FEATURES Location/Qualifiers
source 1..12201
/organism="Gateway vector pB4nRGW"
/mol_type="other DNA"
/db_xref="taxon:1356424"
misc_feature 114..138
/label=T-DNA right border
/note="T-DNA right border"
primer_bind 341..357
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 385..1219
/regulatory_class="promoter"
/note="35S promoter"
promoter 872..1217
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
misc_feature 1238..1732
/label=nmrfp1
/note="nmrfp1"
CDS 1241..1270
/codon_start=1
/product="Myc (human c-Myc proto-oncogene) epitope tag"
/label=Myc
/translation="EQKLISEEDL"
misc_feature complement(1742..1866)
/label=attR1
/note="attR1"
protein_bind 1742..1866
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
promoter 1919..1949
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
CDS 2003..2662
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=cat
/protein_id="BAV44498.1"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHSCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene 2003..2662
/gene="cat"
/label=cat
CDS 3004..3309
/codon_start=1
/gene="ccdB"
/label=ccdB
/protein_id="BAV44499.1"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
gene 3004..3309
/gene="ccdB"
/label=ccdB
misc_feature 3350..3474
/label=attR2
/note="attR2"
protein_bind complement(3350..3474)
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
regulatory 3484..3893
/regulatory_class="terminator"
/note="NOS terminator"
terminator 3500..3752
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
primer_bind complement(3786..3802)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 3810..3826
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3834..3864)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3879..3900
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
regulatory complement(3927..4186)
/regulatory_class="terminator"
/note="NOS terminator"
terminator 3934..4186
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
CDS complement(4576..5370)
/codon_start=1
/gene="nptII"
/product="neomycin phosphotransferase II"
/label=nptII
/protein_id="BAV44500.1"
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGDDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
gene complement(4576..5370)
/gene="nptII"
/label=nptII
regulatory complement(5383..5689)
/regulatory_class="promoter"
/note="NOS promoter"
promoter complement(5391..5574)
/function="NOS promoter"
/label=NOS promoter
/note="nopaline synthase promoter"
promoter complement(5427..5606)
/label=NOS promoter
/note="nopaline synthase promoter"
misc_feature 5780..5804
/label=T-DNA left border
/note="T-DNA left border"
CDS 6332..7123
/codon_start=1
/gene="aadA"
/product="aminoglycoside adenylyltransferase (Murphy,
1985)"
/label=SmR
/note="confers resistance to spectinomycin and
streptomycin"
/translation="MGEAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPH
SDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAK
RELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLF
EALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQP
VILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
rep_origin 7367..7955
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 8141..8281
/label=bom
/note="basis of mobility region from pBR322"
rep_origin 8625..8819
/label=pVS1 oriV
/note="origin of replication for the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
CDS complement(8885..9952)
/codon_start=1
/product="replication protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
/label=pVS1 RepA
/translation="GRKPSGPVQIGAALGDDLVEKLKAAQAAQRQRIEAEARPGESWQA
AADRIRKESRQPPAAGAPSIRKPPKGDEQPDFFVPMLYDVGTRDSRSIMDVAVFRLSKR
DRRAGEVIRYELPDGHVEVSAGPAGMASVWDYDLVLMAVSHLTESMNRYREGKGDKPGR
VFRPHVADVLKFCRRADGGKQKDDLVETCIRLNTTHVAMQRTKKAKNGRLVTVSEGEAL
ISRYKIVKSETGRPEYIEIELADWMYREITEGKNPDVLTVHPDYFLIDPGIGRFLYRLA
RRAAGKAEARWLFKTIYERSGSAGEFKKFCFTVRKLIGSNDLPEYDLKEEAGQAGPILV
MRYRNLIEGEASAGS"
CDS complement(10386..11015)
/codon_start=1
/product="stability protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
/label=pVS1 StaA
/translation="MKVIAVLNQKGGSGKTTIATHLARALQLAGADVLLVDSDPQGSAR
DWAAVREDQPLTVVGIDRPTIDRDVKAIGRRDFVVIDGAPQAADLAVSAIKAADFVLIP
VQPSPYDIWATADLVELVKQRIEVTDGRLQAAFVVSRAIKGTRIGGEVAEALAGYELPI
LESRITQRVSYPGTAAAGTTVLESEPEGDAAREVQALAAEIKSKLI"