LOCUS Exported 4485 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION TF expression vector pB1H1, complete sequence.
ACCESSION DQ515894
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4485)
AUTHORS Meng X, Brodsky MH, Wolfe SA.
TITLE A bacterial one-hybrid system for determining the DNA-binding
specificity of transcription factors
JOURNAL Nat. Biotechnol. 23 (8), 988-994 (2005)
PUBMED 16041365
REFERENCE 2 (bases 1 to 4485)
AUTHORS Meng X, Brodsky MH, Wolfe SA.
TITLE Direct Submission
JOURNAL Submitted (24-APR-2006) Program in Gene Function and Expression,
University of Massachusetts Medical School, 364 Plantation St.,
Worcester, MA 01605, USA
REFERENCE 3 (bases 1 to 4485)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4485
/organism="TF expression vector pB1H1"
/mol_type="other DNA"
/label=alpha-fused transcription factor expression vector
/note="alpha-fused transcription factor expression vector"
/db_xref="taxon:382947"
promoter complement(220..322)
/label=cat promoter
/note="promoter of the E. coli cat gene encoding
chloramphenicol acetyltransferase"
rep_origin complement(848..1393)
/direction=LEFT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
promoter 1842..1872
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
protein_bind 1880..1896
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 1904..1920
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 1966..2709
/note="RNA polymerase alpha subunit coding region; used for
expressing fusion proteins with transcription factors"
CDS 2719..2742
/codon_start=1
/product="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/label=FLAG
/translation="DYKDDDDK"
CDS complement(4045..219)
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=CmR
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
CDS complement(4045..4482)
/codon_start=1
/gene="Cm"
/product="chloramphenicol acetyltransferase"
/label=Cm
/protein_id="ABF48728.1"
/translation="MAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHI
YSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYT
QGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene complement(4045..4482)
/gene="Cm"
/label=Cm
LOCUS Exported 4485 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION TF expression vector pB1H1, complete sequence.
ACCESSION DQ515894
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4485)
AUTHORS Meng X, Brodsky MH, Wolfe SA.
TITLE A bacterial one-hybrid system for determining the DNA-binding
specificity of transcription factors
JOURNAL Nat. Biotechnol. 23 (8), 988-994 (2005)
PUBMED 16041365
REFERENCE 2 (bases 1 to 4485)
AUTHORS Meng X, Brodsky MH, Wolfe SA.
TITLE Direct Submission
JOURNAL Submitted (24-APR-2006) Program in Gene Function and Expression,
University of Massachusetts Medical School, 364 Plantation St.,
Worcester, MA 01605, USA
REFERENCE 3 (bases 1 to 4485)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4485
/organism="TF expression vector pB1H1"
/mol_type="other DNA"
/label=alpha-fused transcription factor expression vector
/note="alpha-fused transcription factor expression vector"
/db_xref="taxon:382947"
promoter complement(220..322)
/label=cat promoter
/note="promoter of the E. coli cat gene encoding
chloramphenicol acetyltransferase"
rep_origin complement(848..1393)
/direction=LEFT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
promoter 1842..1872
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
protein_bind 1880..1896
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 1904..1920
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 1966..2709
/note="RNA polymerase alpha subunit coding region; used for
expressing fusion proteins with transcription factors"
CDS 2719..2742
/codon_start=1
/product="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/label=FLAG
/translation="DYKDDDDK"
CDS complement(4045..219)
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=CmR
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
CDS complement(4045..4482)
/codon_start=1
/gene="Cm"
/product="chloramphenicol acetyltransferase"
/label=Cm
/protein_id="ABF48728.1"
/translation="MAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHI
YSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYT
QGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
gene complement(4045..4482)
/gene="Cm"
/label=Cm