LOCUS Exported 12237 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pB-Lchsp83-ZsGreen-IRES-tTAo, complete sequence.
ACCESSION KX278432
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 12237)
AUTHORS Yan Y, Scott MJ.
TITLE Transgenic early-larval sexing systems for genetic control of the
Australian sheep blow fly Lucilia cuprina
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 12237)
AUTHORS Yan Y, Scott MJ.
TITLE Direct Submission
JOURNAL Submitted (23-MAY-2016) Entomology, North Carolina State University,
112 Derieux Place, Raleigh, NC 27695-7614, USA
REFERENCE 3 (bases 1 to 12237)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..12237
/organism="Cloning vector pB-Lchsp83-ZsGreen-IRES-tTAo"
/mol_type="other DNA"
/db_xref="taxon:1940697"
CDS 8..1024
/codon_start=1
/product="tTAo"
/label=tTAo
/protein_id="AQA28230.1"
/translation="MVSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWH
VKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLGT
RPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERETPT
TDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGSGPAYSRARTKNNYG
STIEGLLDLPDDDAPEEAGLAAPRLSFLPAGHTRRLSTAPPTDVSLGDELHLDGEDVAM
AHADALDDFDLDMLGDGDSPGPGFTPHDSAPYGALDMADFEFEQMFTDALGIDEYGG"
3UTR 1046..2463
/label=Lctub pA
/note="Lctub pA"
misc_recomb 2466..2723
/label=phiC31 attP
/note="phiC31 attP"
protein_bind 2529..2628
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
mobile_element complement(2761..3443)
/mobile_element_type="transposon:pBAC 5"
primer_bind complement(3621..3637)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 3645..3661
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3669..3699)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3714..3735
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4023..4611)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4782..5642)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(5643..5747)
/gene="bla"
/label=AmpR promoter
primer_bind 6221..6237
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
mobile_element complement(6936..7714)
/mobile_element_type="transposon:pBAC 3"
regulatory 7739..11161
/regulatory_class="promoter"
/note="Lchsp83"
CDS 11162..11857
/codon_start=1
/product="ZsGreen"
/label=ZsGreen
/protein_id="AQA28231.1"
/translation="MAQSKHGLTKEMTMKYRMEGCVDGHKFVITGEGIGYPFKGKQAIN
LCVVEGGPLPFAEDILSAAFMYGNRVFTEYPQDIADYFKNSCPAGYTWDRSFLFEDGAV
CICNADITVSVEENCMYHESKFYGVNFPADGPVMKKMTDNWEPSCEKIIPVPKQGILKG
DVSMYLLLKDGGRLRCQFDTVYKAKSVPRKMPDWHFIQHKLTREDRSDAKNQKWHLTEH
AIASGSALP"
regulatory 11858..12236
/regulatory_class="ribosome_binding_site"
/note="RhPV IRES"
LOCUS Exported 12237 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pB-Lchsp83-ZsGreen-IRES-tTAo, complete sequence.
ACCESSION KX278432
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 12237)
AUTHORS Yan Y, Scott MJ.
TITLE Transgenic early-larval sexing systems for genetic control of the
Australian sheep blow fly Lucilia cuprina
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 12237)
AUTHORS Yan Y, Scott MJ.
TITLE Direct Submission
JOURNAL Submitted (23-MAY-2016) Entomology, North Carolina State University,
112 Derieux Place, Raleigh, NC 27695-7614, USA
REFERENCE 3 (bases 1 to 12237)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..12237
/organism="Cloning vector pB-Lchsp83-ZsGreen-IRES-tTAo"
/mol_type="other DNA"
/db_xref="taxon:1940697"
CDS 8..1024
/codon_start=1
/product="tTAo"
/label=tTAo
/protein_id="AQA28230.1"
/translation="MVSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWH
VKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLGT
RPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERETPT
TDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGSGPAYSRARTKNNYG
STIEGLLDLPDDDAPEEAGLAAPRLSFLPAGHTRRLSTAPPTDVSLGDELHLDGEDVAM
AHADALDDFDLDMLGDGDSPGPGFTPHDSAPYGALDMADFEFEQMFTDALGIDEYGG"
3UTR 1046..2463
/label=Lctub pA
/note="Lctub pA"
misc_recomb 2466..2723
/label=phiC31 attP
/note="phiC31 attP"
protein_bind 2529..2628
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
mobile_element complement(2761..3443)
/mobile_element_type="transposon:pBAC 5"
primer_bind complement(3621..3637)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 3645..3661
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3669..3699)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3714..3735
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4023..4611)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4782..5642)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(5643..5747)
/gene="bla"
/label=AmpR promoter
primer_bind 6221..6237
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
mobile_element complement(6936..7714)
/mobile_element_type="transposon:pBAC 3"
regulatory 7739..11161
/regulatory_class="promoter"
/note="Lchsp83"
CDS 11162..11857
/codon_start=1
/product="ZsGreen"
/label=ZsGreen
/protein_id="AQA28231.1"
/translation="MAQSKHGLTKEMTMKYRMEGCVDGHKFVITGEGIGYPFKGKQAIN
LCVVEGGPLPFAEDILSAAFMYGNRVFTEYPQDIADYFKNSCPAGYTWDRSFLFEDGAV
CICNADITVSVEENCMYHESKFYGVNFPADGPVMKKMTDNWEPSCEKIIPVPKQGILKG
DVSMYLLLKDGGRLRCQFDTVYKAKSVPRKMPDWHFIQHKLTREDRSDAKNQKWHLTEH
AIASGSALP"
regulatory 11858..12236
/regulatory_class="ribosome_binding_site"
/note="RhPV IRES"