LOCUS Exported 7352 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Transposon delivery vector pAW016, complete sequence.
ACCESSION EU146227
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7352)
AUTHORS Wilson AC, Perego M, Hoch JA.
TITLE New transposon delivery plasmids for insertional mutagenesis in
Bacillus anthracis
JOURNAL J. Microbiol. Methods 71 (3), 332-335 (2007)
PUBMED 17931726
REFERENCE 2 (bases 1 to 7352)
AUTHORS Wilson AC, Perego M, Hoch JA.
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2007) Department of Molecular and Experimental,
The Scripps Research Institute, 10550 North Torrey Pines Road, La
Jolla, CA 92037, USA
REFERENCE 3 (bases 1 to 7352)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7352
/organism="Transposon delivery vector pAW016"
/mol_type="other DNA"
/db_xref="taxon:474005"
mobile_element 1..43
/mobile_element_type="transposon:mini-Tn10"
CDS 1204..1986
/codon_start=1
/product="spectinomycin resistance protein"
/label=spectinomycin resistance protein
/protein_id="ABV70023.1"
/translation="MTNLINGKIPNQAIQTLKIVKDLFGSSIVGVYLFGSAVNGGLRIN
SDVDGLVVVNHSLPQLTRKKLTERLMTISGKIGNTDSVRPLEVTVINRSEVVPWQYPPK
REFIYGEWLRGEFENGQIQEPSYDPDLAIVLAQARKNSISLFGPDSSSILVSVPLTDIR
RAIKDSLPELIEGIKGDERNVILTVAAMWQTVTTGEITSKDVAAEWAIPLLPKEHVTLL
DIARKGYRGEWYDKWEGLYSKVKALVKYMKNSIETSLN"
mobile_element complement(2308..2351)
/mobile_element_type="transposon:mini-Tn10"
CDS complement(2540..3190)
/codon_start=1
/product="chloramphenicol resistance protein"
/label=chloramphenicol resistance protein
/protein_id="ABV70024.1"
/translation="MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQE
GYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYWDKLEPLYTIFDGVSKTFSGIWTPV
KNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNSNYL
LPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPNDWLL"
CDS complement(3908..3919)
/codon_start=1
/product="Factor Xa recognition and cleavage site"
/label=Factor Xa site
/translation="IEGR"
CDS 4531..5229
/codon_start=1
/gene="repA"
/product="RepA"
/label=repA
/protein_id="ABV70025.1"
/translation="MAIKNTKARNFGFLLYPDSIPNDWKEKLESLGVSMAVSPLHDMDE
KKDKDTWNSSDVIRNGKHYKKPHYHVIYIARNPVTIESVRNKIKRKLGNSSVAHVEILD
YIKGSYEYLTHESKDAIAKNKHIYDKKDILNINDFDIDRYITLDESQKRELKNLLLDIV
DDYNLVNTKDLMAFIRLRGAEFGILNTNDVKDIVSTNSSAFRLWFEGNYQCGYRASYAK
VLDAETGEIK"
gene 4531..5229
/gene="repA"
/label=repA
CDS complement(5940..6878)
/codon_start=1
/product="transposase"
/label=transposase
/protein_id="ABV70026.1"
/translation="MPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCS
KKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGA
ENWKPISNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPS
PKIYSASAKEPWVLATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRT
SSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRH
SGYTITREDLLVAATLLAQNLFTHGYALGKL"
RBS 7155..7166
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
protein_bind 7207..7223
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
LOCUS Exported 7352 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Transposon delivery vector pAW016, complete sequence.
ACCESSION EU146227
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7352)
AUTHORS Wilson AC, Perego M, Hoch JA.
TITLE New transposon delivery plasmids for insertional mutagenesis in
Bacillus anthracis
JOURNAL J. Microbiol. Methods 71 (3), 332-335 (2007)
PUBMED 17931726
REFERENCE 2 (bases 1 to 7352)
AUTHORS Wilson AC, Perego M, Hoch JA.
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2007) Department of Molecular and Experimental,
The Scripps Research Institute, 10550 North Torrey Pines Road, La
Jolla, CA 92037, USA
REFERENCE 3 (bases 1 to 7352)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7352
/organism="Transposon delivery vector pAW016"
/mol_type="other DNA"
/db_xref="taxon:474005"
mobile_element 1..43
/mobile_element_type="transposon:mini-Tn10"
CDS 1204..1986
/codon_start=1
/product="spectinomycin resistance protein"
/label=spectinomycin resistance protein
/protein_id="ABV70023.1"
/translation="MTNLINGKIPNQAIQTLKIVKDLFGSSIVGVYLFGSAVNGGLRIN
SDVDGLVVVNHSLPQLTRKKLTERLMTISGKIGNTDSVRPLEVTVINRSEVVPWQYPPK
REFIYGEWLRGEFENGQIQEPSYDPDLAIVLAQARKNSISLFGPDSSSILVSVPLTDIR
RAIKDSLPELIEGIKGDERNVILTVAAMWQTVTTGEITSKDVAAEWAIPLLPKEHVTLL
DIARKGYRGEWYDKWEGLYSKVKALVKYMKNSIETSLN"
mobile_element complement(2308..2351)
/mobile_element_type="transposon:mini-Tn10"
CDS complement(2540..3190)
/codon_start=1
/product="chloramphenicol resistance protein"
/label=chloramphenicol resistance protein
/protein_id="ABV70024.1"
/translation="MNFNKIDLDNWKRKEIFNHYLNQQTTFSITTEIDISVLYRNIKQE
GYKFYPAFIFLVTRVINSNTAFRTGYNSDGELGYWDKLEPLYTIFDGVSKTFSGIWTPV
KNDFKEFYDLYLSDVEKYNGSGKLFPKTPIPENAFSLSIIPWTSFTGFNLNINNNSNYL
LPIITAGKFINKGNSIYLPLSLQVHHSVCDGYHAGLFMNSIQELSDRPNDWLL"
CDS complement(3908..3919)
/codon_start=1
/product="Factor Xa recognition and cleavage site"
/label=Factor Xa site
/translation="IEGR"
CDS 4531..5229
/codon_start=1
/gene="repA"
/product="RepA"
/label=repA
/protein_id="ABV70025.1"
/translation="MAIKNTKARNFGFLLYPDSIPNDWKEKLESLGVSMAVSPLHDMDE
KKDKDTWNSSDVIRNGKHYKKPHYHVIYIARNPVTIESVRNKIKRKLGNSSVAHVEILD
YIKGSYEYLTHESKDAIAKNKHIYDKKDILNINDFDIDRYITLDESQKRELKNLLLDIV
DDYNLVNTKDLMAFIRLRGAEFGILNTNDVKDIVSTNSSAFRLWFEGNYQCGYRASYAK
VLDAETGEIK"
gene 4531..5229
/gene="repA"
/label=repA
CDS complement(5940..6878)
/codon_start=1
/product="transposase"
/label=transposase
/protein_id="ABV70026.1"
/translation="MPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCS
KKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGA
ENWKPISNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPS
PKIYSASAKEPWVLATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRT
SSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRH
SGYTITREDLLVAATLLAQNLFTHGYALGKL"
RBS 7155..7166
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
protein_bind 7207..7223
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."