LOCUS Exported 5467 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector paT7P-3, complete sequence.
ACCESSION KX980036
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5467)
AUTHORS Han T, Chen Q, Liu H.
TITLE Engineered photoactivatable genetic switches based on the bacterium
phage T7 RNA polymerase
JOURNAL ACS Synth Biol (2016) In press
PUBMED 27794600
REFERENCE 2 (bases 1 to 5467)
AUTHORS Han T, Chen Q, Liu H.
TITLE Direct Submission
JOURNAL Submitted (11-OCT-2016) School of Life Sciences, University of
Science and Technology of China, University of Science and
Technology of China, No.96, JinZhai Road Baohe District,Hefei,Anhui,
230026,P.R.China, Hefei, Anhui 230026, China
REFERENCE 3 (bases 1 to 5467)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: Vector NTI v. Vector NTI Advance (TM) 11.0
Assembly Name :: paT7P-3
Coverage :: 5467bp
Sequencing Technology :: 454
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5467
/organism="Expression vector paT7P-3"
/mol_type="other DNA"
/db_xref="taxon:1920046"
terminator 73..116
/label=bacterial terminator
/note="putative bacterial transcription terminator"
regulatory 125..162
/regulatory_class="promoter"
regulatory 179..190
/regulatory_class="ribosome_binding_site"
RBS 179..190
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
CDS 197..3364
/codon_start=1
/product="pMagT7P"
/label=pMagT7P
/note="chimera of pMag-T7 RNAP"
/protein_id="APD28474.1"
/translation="MNTINIAKNDFSDIELAAIPFNTLADHYGERLAREQLALEHESYE
MGEARFRKMFERQLKAGEVADNAAAKPLITTLLPKMIARINDWFEEVKAKRGKRPTAFQ
FLQEIKPEAVAYITIKTTLACLTSADNTTVQAVASAIGRAIEDEARFGRIRDLEAKHFK
KNVEEQLNKRVGHVYKKAFMQVVEADMLSKGLLGGEAWSSWHKEDSIHVGVRCIEMLIE
STGMVSLHRQNAGVVGQDSETIELAPEYAEAIATRAGALAGISPMFQPCVVPPKPWTGI
TGGGYWANGRRPLALVRTHSKKALMRYEDVYMPEVYKAINIAQNTAWKINKKVLAVANV
ITKWKHCPVEDIPAIEREELPMKPEDIDMNPEALTAWKRAAAAVYRKDKARKSRRISLE
FMLEQANKFANHKAIWFPYNMDWRGRVYAVSMFNPQGNDMTKGLLTLAKGKPIGKEGYY
WLKIHGANCAGVDKVPFPERIKFIEENHENIMACAKSPLENTWWAEQDSPFCFLAFCFE
YAGVQHHGLSYNCSLPLAFDGSCSGIQHFSAMLRDEVGGRAVNLLPSEFGGSGGSGGSG
HTLYAPGGYDIMGYLRQIRNRPNPQVELGPVDTSCALILCDLKQKDTPIVYASEAFLYM
TGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKAIDRNAEVQVEVVNFKK
NGQRFVNFLTMIPVRDETGEYRYSMGFQCETEGGSGGSGGGSETVQDIYGIVAKKVNEI
LQADAINGTDNEVVTVTDENTGEISEKVKLGTKALAGQWLAYGVTRSVTKRSVMTLAYG
SKEFGFRQQVLEDTIQPAIDSGKGLMFTQPNQAAGYMAKLIWESVSVTVVAAVEAMNWL
KSAAKLLAAEVKDKKTGEILRKRCAVHWVTPDGFPVWQEYKKPIQTRLNLMFLGQFRLQ
PTINTNKDSEIDAHKQESGIAPNFVHSQDGSHLRKTVVWAHEKYGIESFALIHDSFGTI
PADAANLFKAVRETMVDTYESCDVLADFYDQFADQLHESQLDKMPALPAKGNLNLRDIL
ESDFAFA"
regulatory 3371..3404
/regulatory_class="terminator"
terminator 3425..3482
/label=his operon terminator
/note="This putative transcriptin terminator from the E.
coli his operon has a 2-bp deletion introduced during
synthesis. Its efficiency has not been determined."
rep_origin complement(3663..4276)
/direction=LEFT
rep_origin complement(3677..4265)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4498..5313)
/codon_start=1
/product="KanR"
/label=KanR
/protein_id="APD28475.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
LOCUS Exported 5467 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Expression vector paT7P-3, complete sequence.
ACCESSION KX980036
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5467)
AUTHORS Han T, Chen Q, Liu H.
TITLE Engineered photoactivatable genetic switches based on the bacterium
phage T7 RNA polymerase
JOURNAL ACS Synth Biol (2016) In press
PUBMED 27794600
REFERENCE 2 (bases 1 to 5467)
AUTHORS Han T, Chen Q, Liu H.
TITLE Direct Submission
JOURNAL Submitted (11-OCT-2016) School of Life Sciences, University of
Science and Technology of China, University of Science and
Technology of China, No.96, JinZhai Road Baohe District,Hefei,Anhui,
230026,P.R.China, Hefei, Anhui 230026, China
REFERENCE 3 (bases 1 to 5467)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: Vector NTI v. Vector NTI Advance (TM) 11.0
Assembly Name :: paT7P-3
Coverage :: 5467bp
Sequencing Technology :: 454
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5467
/organism="Expression vector paT7P-3"
/mol_type="other DNA"
/db_xref="taxon:1920046"
terminator 73..116
/label=bacterial terminator
/note="putative bacterial transcription terminator"
regulatory 125..162
/regulatory_class="promoter"
regulatory 179..190
/regulatory_class="ribosome_binding_site"
RBS 179..190
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
CDS 197..3364
/codon_start=1
/product="pMagT7P"
/label=pMagT7P
/note="chimera of pMag-T7 RNAP"
/protein_id="APD28474.1"
/translation="MNTINIAKNDFSDIELAAIPFNTLADHYGERLAREQLALEHESYE
MGEARFRKMFERQLKAGEVADNAAAKPLITTLLPKMIARINDWFEEVKAKRGKRPTAFQ
FLQEIKPEAVAYITIKTTLACLTSADNTTVQAVASAIGRAIEDEARFGRIRDLEAKHFK
KNVEEQLNKRVGHVYKKAFMQVVEADMLSKGLLGGEAWSSWHKEDSIHVGVRCIEMLIE
STGMVSLHRQNAGVVGQDSETIELAPEYAEAIATRAGALAGISPMFQPCVVPPKPWTGI
TGGGYWANGRRPLALVRTHSKKALMRYEDVYMPEVYKAINIAQNTAWKINKKVLAVANV
ITKWKHCPVEDIPAIEREELPMKPEDIDMNPEALTAWKRAAAAVYRKDKARKSRRISLE
FMLEQANKFANHKAIWFPYNMDWRGRVYAVSMFNPQGNDMTKGLLTLAKGKPIGKEGYY
WLKIHGANCAGVDKVPFPERIKFIEENHENIMACAKSPLENTWWAEQDSPFCFLAFCFE
YAGVQHHGLSYNCSLPLAFDGSCSGIQHFSAMLRDEVGGRAVNLLPSEFGGSGGSGGSG
HTLYAPGGYDIMGYLRQIRNRPNPQVELGPVDTSCALILCDLKQKDTPIVYASEAFLYM
TGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKAIDRNAEVQVEVVNFKK
NGQRFVNFLTMIPVRDETGEYRYSMGFQCETEGGSGGSGGGSETVQDIYGIVAKKVNEI
LQADAINGTDNEVVTVTDENTGEISEKVKLGTKALAGQWLAYGVTRSVTKRSVMTLAYG
SKEFGFRQQVLEDTIQPAIDSGKGLMFTQPNQAAGYMAKLIWESVSVTVVAAVEAMNWL
KSAAKLLAAEVKDKKTGEILRKRCAVHWVTPDGFPVWQEYKKPIQTRLNLMFLGQFRLQ
PTINTNKDSEIDAHKQESGIAPNFVHSQDGSHLRKTVVWAHEKYGIESFALIHDSFGTI
PADAANLFKAVRETMVDTYESCDVLADFYDQFADQLHESQLDKMPALPAKGNLNLRDIL
ESDFAFA"
regulatory 3371..3404
/regulatory_class="terminator"
terminator 3425..3482
/label=his operon terminator
/note="This putative transcriptin terminator from the E.
coli his operon has a 2-bp deletion introduced during
synthesis. Its efficiency has not been determined."
rep_origin complement(3663..4276)
/direction=LEFT
rep_origin complement(3677..4265)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4498..5313)
/codon_start=1
/product="KanR"
/label=KanR
/protein_id="APD28475.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"