LOCUS Exported 5963 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pARO191 DNA, complete sequence.
ACCESSION LC143897
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5963)
AUTHORS Okamoto S.
TITLE cloning vector pARO191 sequence
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5963)
AUTHORS Okamoto S, Niki H.
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2016) Contact:Sho Okamoto National Institute of
Genetics, Microbial Genetics Laboratory, Genetics Strains Research
Center; 1111 Yata, Mishima, Shizuoka 411-8540, Japan URL
:https://www.nig.ac.jp/labs/MicroGen/
REFERENCE 3 (bases 1 to 5963)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5963
/organism="Cloning vector pARO191"
/mol_type="other DNA"
/db_xref="taxon:1825575"
CDS complement(692..1015)
/codon_start=1
/gene="lacZ"
/product="LacZ fragment"
/label=lacZ
/protein_id="BAV00619.1"
/translation="MTMITPSLHACRSTLEDPRVPSSNSLAVVLQRRDWENPGVTQLNR
LAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHRIWCTLSTICS
DAA"
gene complement(692..1015)
/gene="lacZ"
/label=lacZ
primer_bind 925..941
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 942..998
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(1011..1027)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1035..1051
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1059..1089)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1104..1125
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin 1413..2001
/label=pMB1 ori
/note="pMB1 ori"
misc_feature 2427..2567
/gene="bom"
/label=basis of mobility region from pBR322
/note="basis of mobility region from pBR322"
gene 2427..2567
/gene="bom"
/label=bom
rep_origin complement(2753..3341)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4374..5189)
/codon_start=1
/gene="kanR"
/product="aminoglycoside phosphotransferase"
/label=kanR
/protein_id="BAV00620.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
gene complement(4374..5189)
/gene="kanR"
/label=kanR
oriT 5443..5552
terminator 5604..5647
/label=bacterial terminator
/note="putative bacterial transcription terminator"
LOCUS Exported 5963 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pARO191 DNA, complete sequence.
ACCESSION LC143897
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5963)
AUTHORS Okamoto S.
TITLE cloning vector pARO191 sequence
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5963)
AUTHORS Okamoto S, Niki H.
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2016) Contact:Sho Okamoto National Institute of
Genetics, Microbial Genetics Laboratory, Genetics Strains Research
Center; 1111 Yata, Mishima, Shizuoka 411-8540, Japan URL
:https://www.nig.ac.jp/labs/MicroGen/
REFERENCE 3 (bases 1 to 5963)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5963
/organism="Cloning vector pARO191"
/mol_type="other DNA"
/db_xref="taxon:1825575"
CDS complement(692..1015)
/codon_start=1
/gene="lacZ"
/product="LacZ fragment"
/label=lacZ
/protein_id="BAV00619.1"
/translation="MTMITPSLHACRSTLEDPRVPSSNSLAVVLQRRDWENPGVTQLNR
LAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCGISHRIWCTLSTICS
DAA"
gene complement(692..1015)
/gene="lacZ"
/label=lacZ
primer_bind 925..941
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 942..998
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(1011..1027)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1035..1051
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1059..1089)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1104..1125
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin 1413..2001
/label=pMB1 ori
/note="pMB1 ori"
misc_feature 2427..2567
/gene="bom"
/label=basis of mobility region from pBR322
/note="basis of mobility region from pBR322"
gene 2427..2567
/gene="bom"
/label=bom
rep_origin complement(2753..3341)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4374..5189)
/codon_start=1
/gene="kanR"
/product="aminoglycoside phosphotransferase"
/label=kanR
/protein_id="BAV00620.1"
/translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
gene complement(4374..5189)
/gene="kanR"
/label=kanR
oriT 5443..5552
terminator 5604..5647
/label=bacterial terminator
/note="putative bacterial transcription terminator"