LOCUS Exported 5424 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pAMEXlox-1, complete sequence.
ACCESSION MH453956
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5424)
AUTHORS Lu Y.
TITLE Establishing a novel L-ornithine self-sufficient cell factory with
enhanced production of fusarinine C through metabolic engineering in
Aureobasidium melanogenum HN6.2
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5424)
AUTHORS Lu Y.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2018) Ocean University of China, College of Marine
Life, 5 Yushan Road, Qingdao, Shangdong 266003, China
REFERENCE 3 (bases 1 to 5424)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5424
/organism="Cloning vector pAMEXlox-1"
/mol_type="other DNA"
/db_xref="taxon:2419936"
promoter 96..200
/gene="bla"
/label=AmpR promoter
CDS 201..1061
/codon_start=1
/gene="ampR"
/product="ampicillin resistance protein"
/label=ampR
/note="AmpR"
/protein_id="AYE54091.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 201..1061
/gene="ampR"
/label=ampR
rep_origin 1232..1820
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2108..2129
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2144..2174
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2182..2198
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2206..2222
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
regulatory 2717..3094
/regulatory_class="promoter"
protein_bind 3143..3176
/label=lox71
/bound_moiety="Cre recombinase"
/note="Left element (LE) mutant of loxP (Araki et al.,
2010). Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
polyA_signal 3187..3361
/label=CaMV poly(A) signal
/note="cauliflower mosaic virus polyadenylation signal"
CDS complement(3402..3971)
/codon_start=1
/gene="nat"
/product="nourseothricin-resistance protein"
/label=nat
/note="NAT"
/protein_id="AYE54092.1"
/translation="MTTLDDTAYRYRTSVPGDAEAIEALDGSFTTDTVFRVTATGDGFT
LREVPVDPPLTKVFPDDESDDESDAGEDGDPDSRTFVAYGDDGDLAGFVVVSYSGWNRR
LTVEDIEVAPEHRGHGVGRALMGLATEFARERGAGHLWLEVTNVNAPAIHAYRRMGFTL
CGLDTALYDGTASDGEQALYMSMPCP"
gene complement(3402..3971)
/gene="nat"
/label=nat
protein_bind 4418..4451
/label=lox66
/bound_moiety="Cre recombinase"
/note="Right element (RE) mutant of loxP (Araki et al.,
2010). Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
primer_bind complement(5030..5046)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 5424 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pAMEXlox-1, complete sequence.
ACCESSION MH453956
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5424)
AUTHORS Lu Y.
TITLE Establishing a novel L-ornithine self-sufficient cell factory with
enhanced production of fusarinine C through metabolic engineering in
Aureobasidium melanogenum HN6.2
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5424)
AUTHORS Lu Y.
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2018) Ocean University of China, College of Marine
Life, 5 Yushan Road, Qingdao, Shangdong 266003, China
REFERENCE 3 (bases 1 to 5424)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5424
/organism="Cloning vector pAMEXlox-1"
/mol_type="other DNA"
/db_xref="taxon:2419936"
promoter 96..200
/gene="bla"
/label=AmpR promoter
CDS 201..1061
/codon_start=1
/gene="ampR"
/product="ampicillin resistance protein"
/label=ampR
/note="AmpR"
/protein_id="AYE54091.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 201..1061
/gene="ampR"
/label=ampR
rep_origin 1232..1820
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2108..2129
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2144..2174
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2182..2198
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2206..2222
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
regulatory 2717..3094
/regulatory_class="promoter"
protein_bind 3143..3176
/label=lox71
/bound_moiety="Cre recombinase"
/note="Left element (LE) mutant of loxP (Araki et al.,
2010). Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
polyA_signal 3187..3361
/label=CaMV poly(A) signal
/note="cauliflower mosaic virus polyadenylation signal"
CDS complement(3402..3971)
/codon_start=1
/gene="nat"
/product="nourseothricin-resistance protein"
/label=nat
/note="NAT"
/protein_id="AYE54092.1"
/translation="MTTLDDTAYRYRTSVPGDAEAIEALDGSFTTDTVFRVTATGDGFT
LREVPVDPPLTKVFPDDESDDESDAGEDGDPDSRTFVAYGDDGDLAGFVVVSYSGWNRR
LTVEDIEVAPEHRGHGVGRALMGLATEFARERGAGHLWLEVTNVNAPAIHAYRRMGFTL
CGLDTALYDGTASDGEQALYMSMPCP"
gene complement(3402..3971)
/gene="nat"
/label=nat
protein_bind 4418..4451
/label=lox66
/bound_moiety="Cre recombinase"
/note="Right element (RE) mutant of loxP (Araki et al.,
2010). Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
primer_bind complement(5030..5046)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"