LOCUS Exported 3410 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pAM434, complete sequence.
ACCESSION AF435436
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3410)
AUTHORS Flannagan SE, Clewell DB.
TITLE Identification and characterization of genes encoding sex pheromone
cAM373 activity in Enterococcus faecalis and Staphylococcus aureus
JOURNAL Mol. Microbiol. 44 (3), 803-817 (2002)
PUBMED 11994160
REFERENCE 2 (bases 1 to 3410)
AUTHORS Flannagan SE, Clewell DB.
TITLE Direct Submission
JOURNAL Submitted (18-OCT-2001) School of Dentistry, The University of
Michigan, 1011 N. University Ave., Ann Arbor, MI 48109-1078, USA
REFERENCE 3 (bases 1 to 3410)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3410
/organism="Cloning vector pAM434"
/lab_host="Escherichia coli"
/mol_type="genomic DNA"
/db_xref="taxon:192850"
misc_feature 1..58
/label=cloning region
/note="cloning region"
promoter complement(40..58)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(79..95)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 103..119
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(127..157)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 172..193
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(481..1069)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
primer_bind 1474..1490
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 1500..1626
/label=cloning region
/note="cloning region"
promoter 1500..1518
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind 1579..1595
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
gene 2454..3279
/gene="erm(B)"
/label=erm(B)
regulatory 2454..2459
/regulatory_class="minus_35_signal"
/gene="erm(B)"
regulatory 2481..2486
/regulatory_class="minus_10_signal"
/gene="erm(B)"
regulatory 2530..2534
/regulatory_class="ribosome_binding_site"
/gene="erm(B)"
CDS 2542..3279
/codon_start=1
/gene="erm(B)"
/product="Erm(B)"
/label=erm(B)
/note="erythromycin resistance protein; Erm(B)"
/protein_id="AAM26278.1"
/translation="MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT
KLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGSIPYH
LSTQIIKKVVFESHASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFH
PKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNN
LSTVTYEQVLSIFNSYLLFNGRK"
LOCUS Exported 3410 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pAM434, complete sequence.
ACCESSION AF435436
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3410)
AUTHORS Flannagan SE, Clewell DB.
TITLE Identification and characterization of genes encoding sex pheromone
cAM373 activity in Enterococcus faecalis and Staphylococcus aureus
JOURNAL Mol. Microbiol. 44 (3), 803-817 (2002)
PUBMED 11994160
REFERENCE 2 (bases 1 to 3410)
AUTHORS Flannagan SE, Clewell DB.
TITLE Direct Submission
JOURNAL Submitted (18-OCT-2001) School of Dentistry, The University of
Michigan, 1011 N. University Ave., Ann Arbor, MI 48109-1078, USA
REFERENCE 3 (bases 1 to 3410)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3410
/organism="Cloning vector pAM434"
/lab_host="Escherichia coli"
/mol_type="genomic DNA"
/db_xref="taxon:192850"
misc_feature 1..58
/label=cloning region
/note="cloning region"
promoter complement(40..58)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(79..95)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 103..119
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(127..157)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 172..193
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(481..1069)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
primer_bind 1474..1490
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 1500..1626
/label=cloning region
/note="cloning region"
promoter 1500..1518
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind 1579..1595
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
gene 2454..3279
/gene="erm(B)"
/label=erm(B)
regulatory 2454..2459
/regulatory_class="minus_35_signal"
/gene="erm(B)"
regulatory 2481..2486
/regulatory_class="minus_10_signal"
/gene="erm(B)"
regulatory 2530..2534
/regulatory_class="ribosome_binding_site"
/gene="erm(B)"
CDS 2542..3279
/codon_start=1
/gene="erm(B)"
/product="Erm(B)"
/label=erm(B)
/note="erythromycin resistance protein; Erm(B)"
/protein_id="AAM26278.1"
/translation="MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTT
KLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGSIPYH
LSTQIIKKVVFESHASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFH
PKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNN
LSTVTYEQVLSIFNSYLLFNGRK"