LOCUS Exported 12480 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector p5E-smyhc1, complete sequence.
ACCESSION JN715851
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 12480)
AUTHORS Hall TE, Currie PD.
TITLE Direct Submission
JOURNAL Submitted (26-SEP-2011) Australian Regenerative Medicine Institute,
Monash University, Building 75, Melbourne, VIC 3800, Australia
REFERENCE 2 (bases 1 to 12480)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..12480
/organism="Cloning vector p5E-smyhc1"
/mol_type="other DNA"
/note="zebrafish slow myosin heavy chain promoter in pDONR
p4-p1R"
/db_xref="taxon:1115838"
terminator 268..295
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
terminator 387..473
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
primer_bind 536..553
/label=M13-fwd
/note="M13-fwd"
primer_bind 537..553
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_recomb 593..688
/label=attL4
/note="attL4"
protein_bind 593..688
/gene="mutant version of attL"
/label=attL4
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
primer_bind 689..709
/label=T7
/note="T7"
promoter 690..708
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 743..761
/label=I-SceI site
/note="I-SceI site"
regulatory 762..10458
/regulatory_class="promoter"
/note="zebrafish smyhc1 promoter"
primer_bind complement(10505..10524)
/label=T3
/note="T3"
promoter complement(10507..10525)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
protein_bind 10525..10649
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_recomb 10526..10546
/label=attB1
/note="attB1"
primer_bind complement(10721..10742)
/label=T7
/note="T7"
promoter complement(10722..10740)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(10741..10761)
/label=M13-rev
/note="M13-rev"
primer_bind complement(10745..10761)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 10874..11683
/codon_start=1
/product="kanamycin resistance protein"
/label=kanamycin resistance protein
/protein_id="AET83976.1"
/translation="MSHIQRETSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYGKP
DAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGKTA
FQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASD
FDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD
RYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
misc_feature 11804..12477
/label=pUC ori
/note="pUC ori"
rep_origin 11830..12418
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
LOCUS Exported 12480 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector p5E-smyhc1, complete sequence.
ACCESSION JN715851
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 12480)
AUTHORS Hall TE, Currie PD.
TITLE Direct Submission
JOURNAL Submitted (26-SEP-2011) Australian Regenerative Medicine Institute,
Monash University, Building 75, Melbourne, VIC 3800, Australia
REFERENCE 2 (bases 1 to 12480)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..12480
/organism="Cloning vector p5E-smyhc1"
/mol_type="other DNA"
/note="zebrafish slow myosin heavy chain promoter in pDONR
p4-p1R"
/db_xref="taxon:1115838"
terminator 268..295
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
terminator 387..473
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
primer_bind 536..553
/label=M13-fwd
/note="M13-fwd"
primer_bind 537..553
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_recomb 593..688
/label=attL4
/note="attL4"
protein_bind 593..688
/gene="mutant version of attL"
/label=attL4
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
primer_bind 689..709
/label=T7
/note="T7"
promoter 690..708
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 743..761
/label=I-SceI site
/note="I-SceI site"
regulatory 762..10458
/regulatory_class="promoter"
/note="zebrafish smyhc1 promoter"
primer_bind complement(10505..10524)
/label=T3
/note="T3"
promoter complement(10507..10525)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
protein_bind 10525..10649
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_recomb 10526..10546
/label=attB1
/note="attB1"
primer_bind complement(10721..10742)
/label=T7
/note="T7"
promoter complement(10722..10740)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(10741..10761)
/label=M13-rev
/note="M13-rev"
primer_bind complement(10745..10761)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 10874..11683
/codon_start=1
/product="kanamycin resistance protein"
/label=kanamycin resistance protein
/protein_id="AET83976.1"
/translation="MSHIQRETSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYGKP
DAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGKTA
FQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASD
FDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD
RYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
misc_feature 11804..12477
/label=pUC ori
/note="pUC ori"
rep_origin 11830..12418
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"