LOCUS Exported 4401 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector p3E-mCherry-T2A-EGFPcaax, complete sequence.
ACCESSION JN717246
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4401)
AUTHORS Hall TE, Currie PD.
TITLE Direct Submission
JOURNAL Submitted (27-SEP-2011) Australian Regenerative Medicine Institute,
Monash University, Building 75, Melbourne, VIC 3800, Australia
REFERENCE 2 (bases 1 to 4401)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4401
/organism="Cloning vector p3E-mCherry-T2A-EGFPcaax"
/mol_type="other DNA"
/label=mCherry-T2A-EGFPcaax in pDONR p2R-p3
/note="mCherry-T2A-EGFPcaax in pDONR p2R-p3"
/db_xref="taxon:1115842"
terminator 268..295
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
terminator 387..473
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
primer_bind 536..553
/label=M13-fwd
/note="M13-fwd"
primer_bind 537..553
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(624..748)
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_recomb complement(727..747)
/label=attB2
/note="attB2"
misc_feature 756..1463
/label=similar to mCherry
/note="similar to mCherry"
CDS 756..1463
/codon_start=1
/product="monomeric derivative of DsRed fluorescent protein
(Shaner et al., 2004)"
/label=mCherry
/note="mammalian codon-optimized"
/translation="MVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEG
TQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNF
EDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALK
GEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERA
EGRHSTGGMDELYK"
misc_feature 1464..1517
/label=T2A viral peptide
/note="T2A viral peptide"
CDS 1464..1517
/codon_start=1
/product="2A peptide from Thosea asigna virus capsid
protein"
/label=T2A
/note="Eukaryotic ribosomes fail to insert a peptide bond
between the Gly and Pro residues, yielding separate
polypeptides."
/translation="EGRGSLLTCGDVEENPGP"
misc_feature 1518..2234
/label=similar to EGFP
/note="similar to EGFP"
CDS 1518..2234
/codon_start=1
/product="enhanced GFP"
/label=EGFP
/note="mammalian codon-optimized"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYK"
misc_feature 2250..2312
/label=CAAX membrane tag (H-ras)
/note="CAAX membrane tag (H-ras)"
polyA_signal 2313..2447
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
regulatory 2317..2508
/regulatory_class="polyA_signal_sequence"
/note="SV40 polyA"
misc_recomb complement(2510..2605)
/label=attL3
/note="attL3"
protein_bind complement(2510..2605)
/gene="mutant version of attL"
/label=attL3
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_recomb complement(2510..2530)
/label=attB3
/note="attB3"
primer_bind complement(2642..2663)
/label=T7
/note="T7"
promoter complement(2643..2661)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(2662..2682)
/label=M13-rev
/note="M13-rev"
primer_bind complement(2666..2682)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 2795..3604
/codon_start=1
/product="kanamycin resistance protein"
/label=kanamycin resistance protein
/protein_id="AET83981.1"
/translation="MSHIQRETSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYGKP
DAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGKTA
FQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASD
FDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD
RYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
misc_feature 3725..4398
/label=pUC ori
/note="pUC ori"
rep_origin 3751..4339
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
LOCUS Exported 4401 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector p3E-mCherry-T2A-EGFPcaax, complete sequence.
ACCESSION JN717246
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4401)
AUTHORS Hall TE, Currie PD.
TITLE Direct Submission
JOURNAL Submitted (27-SEP-2011) Australian Regenerative Medicine Institute,
Monash University, Building 75, Melbourne, VIC 3800, Australia
REFERENCE 2 (bases 1 to 4401)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4401
/organism="Cloning vector p3E-mCherry-T2A-EGFPcaax"
/mol_type="other DNA"
/label=mCherry-T2A-EGFPcaax in pDONR p2R-p3
/note="mCherry-T2A-EGFPcaax in pDONR p2R-p3"
/db_xref="taxon:1115842"
terminator 268..295
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
terminator 387..473
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
primer_bind 536..553
/label=M13-fwd
/note="M13-fwd"
primer_bind 537..553
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(624..748)
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_recomb complement(727..747)
/label=attB2
/note="attB2"
misc_feature 756..1463
/label=similar to mCherry
/note="similar to mCherry"
CDS 756..1463
/codon_start=1
/product="monomeric derivative of DsRed fluorescent protein
(Shaner et al., 2004)"
/label=mCherry
/note="mammalian codon-optimized"
/translation="MVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEG
TQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNF
EDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALK
GEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERA
EGRHSTGGMDELYK"
misc_feature 1464..1517
/label=T2A viral peptide
/note="T2A viral peptide"
CDS 1464..1517
/codon_start=1
/product="2A peptide from Thosea asigna virus capsid
protein"
/label=T2A
/note="Eukaryotic ribosomes fail to insert a peptide bond
between the Gly and Pro residues, yielding separate
polypeptides."
/translation="EGRGSLLTCGDVEENPGP"
misc_feature 1518..2234
/label=similar to EGFP
/note="similar to EGFP"
CDS 1518..2234
/codon_start=1
/product="enhanced GFP"
/label=EGFP
/note="mammalian codon-optimized"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYK"
misc_feature 2250..2312
/label=CAAX membrane tag (H-ras)
/note="CAAX membrane tag (H-ras)"
polyA_signal 2313..2447
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
regulatory 2317..2508
/regulatory_class="polyA_signal_sequence"
/note="SV40 polyA"
misc_recomb complement(2510..2605)
/label=attL3
/note="attL3"
protein_bind complement(2510..2605)
/gene="mutant version of attL"
/label=attL3
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_recomb complement(2510..2530)
/label=attB3
/note="attB3"
primer_bind complement(2642..2663)
/label=T7
/note="T7"
promoter complement(2643..2661)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(2662..2682)
/label=M13-rev
/note="M13-rev"
primer_bind complement(2666..2682)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
CDS 2795..3604
/codon_start=1
/product="kanamycin resistance protein"
/label=kanamycin resistance protein
/protein_id="AET83981.1"
/translation="MSHIQRETSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYGKP
DAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGKTA
FQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASD
FDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD
RYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
misc_feature 3725..4398
/label=pUC ori
/note="pUC ori"
rep_origin 3751..4339
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"