Koshimizu S, Aono N, Sasaki-Sekimoto Y, Shigenobu S, Shimojima M, Ohta H, Kofuji R, Tamada Y, Murata T, Hasebe M.
p35S-BSD2 载体载体图谱
p35S-BSD2 载体载体序列
LOCUS Exported 4635 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Moss transformation vector p35S-BSD2 DNA, complete sequence.
ACCESSION LC279014
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4635)
AUTHORS Koshimizu S, Aono N, Sasaki-Sekimoto Y, Shigenobu S, Shimojima M,
Ohta H, Kofuji R, Tamada Y, Murata T, Hasebe M.
TITLE Physcomitrella MADS-box genes regulate external water conduction and
sperm movement necessary for fertilization
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4635)
AUTHORS Hiwatashi Y, Koshimizu S, Hasebe M.
TITLE Direct Submission
JOURNAL Submitted (20-JUN-2017) Contact:Shizuka Koshimizu National Institute
for Basic Biology, Division of Evolutionary Biology; Nishigonaka 38,
Myodaiji, Okazaki, Aichi 444-8585, Japan URL
:http://www.nibb.ac.jp/evodevo/
REFERENCE 3 (bases 1 to 4635)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4635
/organism="Moss transformation vector p35S-BSD2"
/mol_type="other DNA"
/db_xref="taxon:2014870"
misc_feature 1..712
/label=pBluescript SKII+
/note="pBluescript SKII+"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind 670..686
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
regulatory 718..1046
/regulatory_class="promoter"
/note="cauliflower mosaic virus 35S promoter"
promoter 766..1111
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
CDS 1147..1539
/codon_start=1
/gene="BSD"
/product="blasticidin S deaminase"
/label=BSD
/protein_id="BBC14925.1"
/translation="MPLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVN
VYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKA
IVKDSDGQPTAVGIRELLPSGYVWEG"
gene 1147..1539
/gene="BSD"
/label=BSD
regulatory 1540..2392
/regulatory_class="terminator"
/note="cauliflower mosaic virus 35S polyA signal"
polyA_signal 1682..1858
/label=CaMV poly(A) signal
/note="cauliflower mosaic virus polyadenylation signal"
misc_feature 2393..4635
/label=pBluescript SKII+
/note="pBluescript SKII+"
primer_bind complement(2394..2410)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2447..2465)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2486..2502)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2510..2526
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2534..2564)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2579..2600
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2888..3476)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3647..4507)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4508..4612)
/gene="bla"
/label=AmpR promoter
Koshimizu S, Aono N, Sasaki-Sekimoto Y, Shigenobu S, Shimojima M, Ohta H, Kofuji R, Tamada Y, Murata T, Hasebe M.
p35S-BSD2 载体载体图谱
p35S-BSD2 载体载体序列
LOCUS Exported 4635 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Moss transformation vector p35S-BSD2 DNA, complete sequence.
ACCESSION LC279014
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4635)
AUTHORS Koshimizu S, Aono N, Sasaki-Sekimoto Y, Shigenobu S, Shimojima M,
Ohta H, Kofuji R, Tamada Y, Murata T, Hasebe M.
TITLE Physcomitrella MADS-box genes regulate external water conduction and
sperm movement necessary for fertilization
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4635)
AUTHORS Hiwatashi Y, Koshimizu S, Hasebe M.
TITLE Direct Submission
JOURNAL Submitted (20-JUN-2017) Contact:Shizuka Koshimizu National Institute
for Basic Biology, Division of Evolutionary Biology; Nishigonaka 38,
Myodaiji, Okazaki, Aichi 444-8585, Japan URL
:http://www.nibb.ac.jp/evodevo/
REFERENCE 3 (bases 1 to 4635)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4635
/organism="Moss transformation vector p35S-BSD2"
/mol_type="other DNA"
/db_xref="taxon:2014870"
misc_feature 1..712
/label=pBluescript SKII+
/note="pBluescript SKII+"
rep_origin complement(3..458)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 600..616
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind 670..686
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
regulatory 718..1046
/regulatory_class="promoter"
/note="cauliflower mosaic virus 35S promoter"
promoter 766..1111
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
CDS 1147..1539
/codon_start=1
/gene="BSD"
/product="blasticidin S deaminase"
/label=BSD
/protein_id="BBC14925.1"
/translation="MPLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVN
VYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGIKA
IVKDSDGQPTAVGIRELLPSGYVWEG"
gene 1147..1539
/gene="BSD"
/label=BSD
regulatory 1540..2392
/regulatory_class="terminator"
/note="cauliflower mosaic virus 35S polyA signal"
polyA_signal 1682..1858
/label=CaMV poly(A) signal
/note="cauliflower mosaic virus polyadenylation signal"
misc_feature 2393..4635
/label=pBluescript SKII+
/note="pBluescript SKII+"
primer_bind complement(2394..2410)
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(2447..2465)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2486..2502)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2510..2526
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2534..2564)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2579..2600
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2888..3476)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3647..4507)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4508..4612)
/gene="bla"
/label=AmpR promoter