LOCUS Exported 3236 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Shuttle vector NgoMIV, complete sequence.
ACCESSION FJ402941
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3236)
AUTHORS Veltman DM, Akar G, Bosgraaf L, van Haastert PJM.
TITLE Direct Submission
JOURNAL Submitted (20-OCT-2008) Cell Biochemistry, Rijks Universiteit
Groningen, Kerklaan 30, Haren 9751 NN, The Netherlands
REFERENCE 2 (bases 1 to 3236)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3236
/organism="Shuttle vector NgoMIV"
/mol_type="other DNA"
/db_xref="taxon:570119"
regulatory 7..290
/regulatory_class="promoter"
/note="act15"
regulatory 320..581
/regulatory_class="terminator"
/note="act8"
primer_bind complement(601..617)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 1091..1195
/gene="bla"
/label=AmpR promoter
CDS 1196..2056
/codon_start=1
/product="penicillin beta-lactamase"
/label=penicillin beta-lactamase
/protein_id="ACJ38093.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 2204..2871
/label=pUC ori
/note="pUC ori"
rep_origin 2227..2815
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3103..3124
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 3139..3169
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3177..3193
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 3201..3217
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 3236 bp ds-DNA circular SYN 18-DEC-2018
DEFINITION Shuttle vector NgoMIV, complete sequence.
ACCESSION FJ402941
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3236)
AUTHORS Veltman DM, Akar G, Bosgraaf L, van Haastert PJM.
TITLE Direct Submission
JOURNAL Submitted (20-OCT-2008) Cell Biochemistry, Rijks Universiteit
Groningen, Kerklaan 30, Haren 9751 NN, The Netherlands
REFERENCE 2 (bases 1 to 3236)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..3236
/organism="Shuttle vector NgoMIV"
/mol_type="other DNA"
/db_xref="taxon:570119"
regulatory 7..290
/regulatory_class="promoter"
/note="act15"
regulatory 320..581
/regulatory_class="terminator"
/note="act8"
primer_bind complement(601..617)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 1091..1195
/gene="bla"
/label=AmpR promoter
CDS 1196..2056
/codon_start=1
/product="penicillin beta-lactamase"
/label=penicillin beta-lactamase
/protein_id="ACJ38093.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 2204..2871
/label=pUC ori
/note="pUC ori"
rep_origin 2227..2815
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3103..3124
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 3139..3169
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 3177..3193
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 3201..3217
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"