Algire MA, Lartigue C, Thomas DW, Assad-Garcia N, Glass JI, Merryman C.
Mini-Tn4001PSpuro 载体载体图谱
Mini-Tn4001PSpuro 载体载体序列
LOCUS Exported 5321 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector Mini-Tn4001PSpuro, complete sequence.
ACCESSION FJ872396
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5321)
AUTHORS Algire MA, Lartigue C, Thomas DW, Assad-Garcia N, Glass JI, Merryman
C.
TITLE New selectable marker for manipulating the simple genomes of
Mycoplasma species
JOURNAL Antimicrob. Agents Chemother. 53 (10), 4429-4432 (2009)
PUBMED 19687239
REFERENCE 2 (bases 1 to 5321)
AUTHORS Merryman C.
TITLE Direct Submission
JOURNAL Submitted (30-MAR-2009) Synthetic Biology, J. Craig Venter
Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA
REFERENCE 3 (bases 1 to 5321)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5321
/organism="Cloning vector Mini-Tn4001PSpuro"
/mol_type="other DNA"
/db_xref="taxon:640477"
CDS complement(1..600)
/codon_start=1
/gene="pac"
/product="puromycin N-acetyltransferase"
/label=pac
/note="puromycin resistance; codon optimized for Mycoplasma
genitalium"
/protein_id="ACR82772.1"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
gene complement(1..600)
/gene="pac"
/label=pac
CDS 1105..2277
/codon_start=1
/gene="tnp"
/product="transposase"
/label=tnp
/protein_id="ACR82773.1"
/translation="MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEY
IQAKEYERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNEKALM
ASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNEWQNRLLSEKNYPY
LMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKER
GLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKKNSKSFREAVKGI
FKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLI
ERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK"
gene 1105..2277
/gene="tnp"
/label=tnp
promoter complement(2298..2316)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(2323..2339)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 2481..2936
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 2962..3066
/gene="bla"
/label=AmpR promoter
CDS 3067..3927
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin resistance"
/protein_id="ACR82774.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 3067..3927
/gene="bla"
/label=bla
rep_origin 4098..4686
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 4974..4995
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 5010..5040
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5048..5064
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 5072..5088
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 5109..5127
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
Algire MA, Lartigue C, Thomas DW, Assad-Garcia N, Glass JI, Merryman C.
Mini-Tn4001PSpuro 载体载体图谱
Mini-Tn4001PSpuro 载体载体序列
LOCUS Exported 5321 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector Mini-Tn4001PSpuro, complete sequence.
ACCESSION FJ872396
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5321)
AUTHORS Algire MA, Lartigue C, Thomas DW, Assad-Garcia N, Glass JI, Merryman
C.
TITLE New selectable marker for manipulating the simple genomes of
Mycoplasma species
JOURNAL Antimicrob. Agents Chemother. 53 (10), 4429-4432 (2009)
PUBMED 19687239
REFERENCE 2 (bases 1 to 5321)
AUTHORS Merryman C.
TITLE Direct Submission
JOURNAL Submitted (30-MAR-2009) Synthetic Biology, J. Craig Venter
Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA
REFERENCE 3 (bases 1 to 5321)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..5321
/organism="Cloning vector Mini-Tn4001PSpuro"
/mol_type="other DNA"
/db_xref="taxon:640477"
CDS complement(1..600)
/codon_start=1
/gene="pac"
/product="puromycin N-acetyltransferase"
/label=pac
/note="puromycin resistance; codon optimized for Mycoplasma
genitalium"
/protein_id="ACR82772.1"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
gene complement(1..600)
/gene="pac"
/label=pac
CDS 1105..2277
/codon_start=1
/gene="tnp"
/product="transposase"
/label=tnp
/protein_id="ACR82773.1"
/translation="MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEY
IQAKEYERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNEKALM
ASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNEWQNRLLSEKNYPY
LMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIGFMIQSGESEETWTTFFEYLKER
GLQGTELVISDAHKGLVSAIRKSFTNVSWQRCQVHFLRNIFTTIPKKNSKSFREAVKGI
FKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLI
ERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK"
gene 1105..2277
/gene="tnp"
/label=tnp
promoter complement(2298..2316)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(2323..2339)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 2481..2936
/direction=RIGHT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 2962..3066
/gene="bla"
/label=AmpR promoter
CDS 3067..3927
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=bla
/note="ampicillin resistance"
/protein_id="ACR82774.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
gene 3067..3927
/gene="bla"
/label=bla
rep_origin 4098..4686
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 4974..4995
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 5010..5040
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5048..5064
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 5072..5088
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 5109..5127
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"