LOCUS Exported 9431 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Expression vector hu-beta-MHC-neo-pgk-hygro, complete sequence.
ACCESSION AY491501
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9431)
AUTHORS Zaehres H.
TITLE Expression vectors for selection of cardiomyocytes from
differentiating stem cells
JOURNAL Patent: DE 10245574-A 27-SEP-2002; CARDION AG; Max-Planck-Str. 15a;
Erkrath; Germany;
REFERENCE 2 (bases 1 to 9431)
AUTHORS Zaehres H.
TITLE Direct Submission
JOURNAL Submitted (30-NOV-2003) CARDION AG, Max-Planck-Str. 15a, Erkrath,
NRW 40699, Germany
REFERENCE 3 (bases 1 to 9431)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..9431
/organism="Expression vector hu-beta-MHC-neo-pgk-hygro"
/mol_type="genomic DNA"
/db_xref="taxon:258837"
regulatory 16..3815
/regulatory_class="promoter"
/note="Homo sapiens beta myosin heavy chain promoter"
CDS 3852..4655
/codon_start=1
/gene="aph(3)-II (or nptII)"
/product="aminoglycoside phosphotransferase from Tn5"
/label=NeoR/KanR
/note="confers resistance to neomycin, kanamycin, and G418
(Geneticin(R))"
/translation="MGSAIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQ
GRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD
LLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE
EHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQ
DIALATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
polyA_signal 4662..4710
/label=HSV TK poly(A) signal
/note="herpes simplex virus thymidine kinase
polyadenylation signal (Cole and Stacy, 1985)"
primer_bind 4751..4767
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter 4791..5290
/label=PGK promoter
/note="mouse phosphoglycerate kinase 1 promoter"
CDS 5308..6333
/codon_start=1
/gene="aph(4)-Ia"
/product="aminoglycoside phosphotransferase from E. coli"
/label=HygR
/note="confers resistance to hygromycin"
/translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDV?GRG
YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
E"
primer_bind complement(6798..6814)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 7288..7392
/gene="bla"
/label=AmpR promoter
CDS 7393..8253
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 8424..9012
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 9300..9321
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 9336..9366
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 9374..9390
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 9398..9414
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
LOCUS Exported 9431 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Expression vector hu-beta-MHC-neo-pgk-hygro, complete sequence.
ACCESSION AY491501
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9431)
AUTHORS Zaehres H.
TITLE Expression vectors for selection of cardiomyocytes from
differentiating stem cells
JOURNAL Patent: DE 10245574-A 27-SEP-2002; CARDION AG; Max-Planck-Str. 15a;
Erkrath; Germany;
REFERENCE 2 (bases 1 to 9431)
AUTHORS Zaehres H.
TITLE Direct Submission
JOURNAL Submitted (30-NOV-2003) CARDION AG, Max-Planck-Str. 15a, Erkrath,
NRW 40699, Germany
REFERENCE 3 (bases 1 to 9431)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..9431
/organism="Expression vector hu-beta-MHC-neo-pgk-hygro"
/mol_type="genomic DNA"
/db_xref="taxon:258837"
regulatory 16..3815
/regulatory_class="promoter"
/note="Homo sapiens beta myosin heavy chain promoter"
CDS 3852..4655
/codon_start=1
/gene="aph(3)-II (or nptII)"
/product="aminoglycoside phosphotransferase from Tn5"
/label=NeoR/KanR
/note="confers resistance to neomycin, kanamycin, and G418
(Geneticin(R))"
/translation="MGSAIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQ
GRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD
LLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE
EHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQ
DIALATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
polyA_signal 4662..4710
/label=HSV TK poly(A) signal
/note="herpes simplex virus thymidine kinase
polyadenylation signal (Cole and Stacy, 1985)"
primer_bind 4751..4767
/label=SK primer
/note="common sequencing primer, one of multiple similar
variants"
promoter 4791..5290
/label=PGK promoter
/note="mouse phosphoglycerate kinase 1 promoter"
CDS 5308..6333
/codon_start=1
/gene="aph(4)-Ia"
/product="aminoglycoside phosphotransferase from E. coli"
/label=HygR
/note="confers resistance to hygromycin"
/translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDV?GRG
YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
E"
primer_bind complement(6798..6814)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 7288..7392
/gene="bla"
/label=AmpR promoter
CDS 7393..8253
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 8424..9012
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 9300..9321
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 9336..9366
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 9374..9390
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 9398..9414
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"