LOCUS Exported 4230 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Control vector HBT-sGFP(S65T)-NOS, complete sequence.
ACCESSION EF090408
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4230)
AUTHORS Sheen J.
TITLE Protein phosphatase activity is required for light-inducible gene
expression in maize
JOURNAL EMBO J. 12 (9), 3497-3505 (1993)
PUBMED 8253076
REFERENCE 2 (bases 1 to 4230)
AUTHORS Chiu W, Niwa Y, Zeng W, Hirano T, Kobayashi H, Sheen J.
TITLE Engineered GFP as a vital reporter in plants
JOURNAL Curr. Biol. 6 (3), 325-330 (1996)
PUBMED 8805250
REFERENCE 3 (bases 1 to 4230)
AUTHORS Sheen J.
TITLE Direct Submission
JOURNAL Submitted (27-OCT-2006) Molecular Biology, Massachusetts General
Hospital, 185 Cambridge St. Simches Research Building-CPZN7600,
Boston, MA 02114, USA
REFERENCE 4 (bases 1 to 4230)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4230
/organism="Control vector HBT-sGFP(S65T)-NOS"
/mol_type="other DNA"
/label=derived from Arabidopsis thaliana
/note="derived from Arabidopsis thaliana"
/db_xref="taxon:412978"
misc_feature 25..2663
/label=pUC18
/note="pUC18"
primer_bind complement(39..55)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 63..79
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(87..117)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 132..153
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(441..1029)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(1200..2060)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(2061..2165)
/gene="bla"
/label=AmpR promoter
primer_bind 2639..2655
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 2675..3019
/regulatory_class="promoter"
/note="CMV35s promoter"
promoter 2722..3231
/label=35SPPDK promoter
/note="hybrid promoter consisting of the cauliflower mosaic
virus 35S enhancer fused to the maize C4PPDK basal promoter
(Yoo et al., 2007)"
regulatory 3044..3231
/regulatory_class="promoter"
/note="C4ppdk1Zm"
CDS 3240..3959
/codon_start=1
/product="sGFP"
/label=sGFP
/note="S65T"
/protein_id="ABL09837.1"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTFTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITHGMDELYK"
terminator 3978..4230
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
regulatory 3981..4230
/regulatory_class="terminator"
/note="NOS terminator"
LOCUS Exported 4230 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Control vector HBT-sGFP(S65T)-NOS, complete sequence.
ACCESSION EF090408
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4230)
AUTHORS Sheen J.
TITLE Protein phosphatase activity is required for light-inducible gene
expression in maize
JOURNAL EMBO J. 12 (9), 3497-3505 (1993)
PUBMED 8253076
REFERENCE 2 (bases 1 to 4230)
AUTHORS Chiu W, Niwa Y, Zeng W, Hirano T, Kobayashi H, Sheen J.
TITLE Engineered GFP as a vital reporter in plants
JOURNAL Curr. Biol. 6 (3), 325-330 (1996)
PUBMED 8805250
REFERENCE 3 (bases 1 to 4230)
AUTHORS Sheen J.
TITLE Direct Submission
JOURNAL Submitted (27-OCT-2006) Molecular Biology, Massachusetts General
Hospital, 185 Cambridge St. Simches Research Building-CPZN7600,
Boston, MA 02114, USA
REFERENCE 4 (bases 1 to 4230)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4230
/organism="Control vector HBT-sGFP(S65T)-NOS"
/mol_type="other DNA"
/label=derived from Arabidopsis thaliana
/note="derived from Arabidopsis thaliana"
/db_xref="taxon:412978"
misc_feature 25..2663
/label=pUC18
/note="pUC18"
primer_bind complement(39..55)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 63..79
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(87..117)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 132..153
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(441..1029)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(1200..2060)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(2061..2165)
/gene="bla"
/label=AmpR promoter
primer_bind 2639..2655
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 2675..3019
/regulatory_class="promoter"
/note="CMV35s promoter"
promoter 2722..3231
/label=35SPPDK promoter
/note="hybrid promoter consisting of the cauliflower mosaic
virus 35S enhancer fused to the maize C4PPDK basal promoter
(Yoo et al., 2007)"
regulatory 3044..3231
/regulatory_class="promoter"
/note="C4ppdk1Zm"
CDS 3240..3959
/codon_start=1
/product="sGFP"
/label=sGFP
/note="S65T"
/protein_id="ABL09837.1"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTFTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITHGMDELYK"
terminator 3978..4230
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
regulatory 3981..4230
/regulatory_class="terminator"
/note="NOS terminator"