LOCUS Exported 4939 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector GmScreamM5-pFLEV, complete sequence.
ACCESSION KX252731
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4939)
AUTHORS Zhang N, McHale LK, Finer JJ.
TITLE Isolation and characterization of GmScream promoters that regulate
highly expressing soybean (Glycine max Merr.) genes
JOURNAL Plant Sci. 241, 189-198 (2015)
PUBMED 26706070
REFERENCE 2 (bases 1 to 4939)
AUTHORS Zhang N.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Horticulture and Crop Science, Ohio State
University, 1680 Madison Ave, Wooster, OH 44691, USA
REFERENCE 3 (bases 1 to 4939)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4939
/organism="Cloning vector GmScreamM5-pFLEV"
/mol_type="other DNA"
/label=derived from Glycine max
/note="derived from Glycine max"
/db_xref="taxon:1890324"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 411..1656
/regulatory_class="promoter"
/note="GmScreamM5 promoter"
CDS 1659..2378
/codon_start=1
/product="sGFP65T"
/label=sGFP65T
/protein_id="AOC59754.1"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTFTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITHGMDELYK"
regulatory 2411..2686
/regulatory_class="terminator"
/note="NOS terminator"
terminator 2411..2663
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
primer_bind complement(2718..2734)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2742..2758
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2766..2796)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2811..2832
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3120..3708)
/direction=LEFT
misc_feature complement(3879..4739)
/label=derived from ampicillin gene
/note="derived from ampicillin gene"
CDS complement(3879..4739)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4740..4844)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 4939 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector GmScreamM5-pFLEV, complete sequence.
ACCESSION KX252731
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4939)
AUTHORS Zhang N, McHale LK, Finer JJ.
TITLE Isolation and characterization of GmScream promoters that regulate
highly expressing soybean (Glycine max Merr.) genes
JOURNAL Plant Sci. 241, 189-198 (2015)
PUBMED 26706070
REFERENCE 2 (bases 1 to 4939)
AUTHORS Zhang N.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Horticulture and Crop Science, Ohio State
University, 1680 Madison Ave, Wooster, OH 44691, USA
REFERENCE 3 (bases 1 to 4939)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4939
/organism="Cloning vector GmScreamM5-pFLEV"
/mol_type="other DNA"
/label=derived from Glycine max
/note="derived from Glycine max"
/db_xref="taxon:1890324"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
regulatory 411..1656
/regulatory_class="promoter"
/note="GmScreamM5 promoter"
CDS 1659..2378
/codon_start=1
/product="sGFP65T"
/label=sGFP65T
/protein_id="AOC59754.1"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTFTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITHGMDELYK"
regulatory 2411..2686
/regulatory_class="terminator"
/note="NOS terminator"
terminator 2411..2663
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
primer_bind complement(2718..2734)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2742..2758
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2766..2796)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2811..2832
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3120..3708)
/direction=LEFT
misc_feature complement(3879..4739)
/label=derived from ampicillin gene
/note="derived from ampicillin gene"
CDS complement(3879..4739)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4740..4844)
/gene="bla"
/label=AmpR promoter