| 载体基本信息 |
| 载体名称 |
Ganesh-Z1 |
载体抗性 |
Ampicillin |
| 载体长度 |
14142 bp |
载体类型 |
Reporter vector |
| 载体来源 |
Swanson CI, Hinrichs T, Johnson LA, Zhao Y, Barolo S. |
Ganesh-Z1 载体载体图谱
Ganesh-Z1 载体载体序列
LOCUS Exported 14142 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Reporter vector Ganesh-Z1, complete sequence.
ACCESSION EF420137
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 14142)
AUTHORS Swanson CI, Hinrichs T, Johnson LA, Zhao Y, Barolo S.
TITLE A directional recombination cloning system for restriction- and
ligation-free construction of GFP, DsRed, and lacZ transgenic
Drosophila reporters
JOURNAL Gene 408 (1-2), 180-186 (2008)
PUBMED 18077106
REFERENCE 2 (bases 1 to 14142)
AUTHORS Rogers CI, Hinrichs T, Johnson LA, Zhao Y, Barolo S.
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2007) Cell & Developmental Biology, University of
Michigan Medical School, 3047 BSRB, 109 Zina Pitcher Place, Ann
Arboe, MI 48109-2200, USA
REFERENCE 3 (bases 1 to 14142)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..14142
/organism="Reporter vector Ganesh-Z1"
/lab_host="Drosophila melanogaster"
/mol_type="other DNA"
/label=Gateway P element nuclear eGFP reporter vector
/note="Gateway P element nuclear eGFP reporter vector"
/db_xref="taxon:427137"
misc_feature 1..233
/label=P element 3 end
/note="P element 3 end"
misc_feature 1..159
/label=P element 3 end
/note="P element 3 end"
gene 242..4247
/gene="white"
/allele="+mC"
/label=white
misc_feature 4250..5964
/note="Gateway recombination cassette containing ccdB and
CmR genes flanked by attR1/attR2 sites"
protein_bind 4255..4379
/gene="mutant version of attR"
/label=attR1
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
promoter 4404..4434
/label=lac UV5 promoter
/note="E. coli lac promoter with an ""up"" mutation"
CDS 4488..5147
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/label=CmR
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
CDS 5489..5794
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/label=ccdB
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
protein_bind complement(5835..5959)
/gene="mutant version of attR"
/label=attR2
/bound_moiety="LR Clonase(TM)"
/note="recombination site for the Gateway(R) LR reaction"
misc_feature 5965..6712
/label=spacer sequence includes partial KanR gene
/note="spacer sequence includes partial KanR gene"
regulatory 6713..6846
/regulatory_class="promoter"
/note="Drosophila melanogaster Hsp70 minimal promoter"
gene 6755..10666
/gene="P transposase-lacZ-SV40t"
/label=P transposase-lacZ-SV40t
/note="NLS-lacZ derived from C4PLZ"
mRNA join(6755..7209,7268..10624)
/gene="P transposase-lacZ-SV40t"
/product="nuclear beta-galactosidase"
/label=P transposase-lacZ-SV40t mRNA
CDS join(6920..7209,7268..10415)
/codon_start=1
/gene="P transposase-lacZ-SV40t"
/product="nuclear beta-galactosidase"
/label=P transposase-lacZ-SV40t
/protein_id="ABN80070.1"
/translation="MKYCKFCCKAVTGVKLIHVPKCAIKRKLWEQSLGCSLGENSQICD
THFNDSQWKAAPAKGQTFKRRRLNADAVPSKVIEPEPEKIKEGYTSGSTQTESCSLFNE
NKSLREKIRTLEYEMRRLEQQSLALAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE
ARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIY
TNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWV
GYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKP
TTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGE
IIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVR
IENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNH
PLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVI
IWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFP
AVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVD
QSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRL
SGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPES
AGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCI
ELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVE
RWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAIT
VDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMY
TPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLN
IDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK"
misc_feature 6920..7352
/gene="P transposase-lacZ-SV40t"
/label=P transposase leader sequence
/note="P transposase leader sequence"
primer_bind complement(7361..7377)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
CDS 7368..10415
/codon_start=1
/gene="lacZ"
/product="beta-galactosidase"
/label=lacZ
/translation="VVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRS
LNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPP
FVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEF
DLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATR
FNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRV
TLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKP
LLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGL
YVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGA
NHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLS
LPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNP
WSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYL
FRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQ
PNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQ
SGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEA
ALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHP
ARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLR
CGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDD
SWSPSVSAEFQLSAGRYHYQLVWCQK"
polyA_signal 10544..10665
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
misc_feature 10797..11382
/label=P element 5 end
/note="P element 5 end"
rep_origin complement(11617..12205)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 11621..13641
/label=pUC8 plasmid sequence containing AmpR gene
/note="pUC8 plasmid sequence containing AmpR gene"
CDS complement(12376..13236)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(13237..13341)
/gene="bla"
/label=AmpR promoter