Linger RJ, Belikoff EJ, Yan Y, Li F, Wantuch HA, Fitzsimons HL, Scott MJ.
DR4 载体载体图谱
DR4 载体载体序列
LOCUS Exported 14499 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector DR4, complete sequence.
ACCESSION KT897710
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 14499)
AUTHORS Linger RJ, Belikoff EJ, Yan Y, Li F, Wantuch HA, Fitzsimons HL,
Scott MJ.
TITLE Towards next generation maggot debridement therapy: transgenic
Lucilia sericata larvae that produce and secrete a human growth
factor
JOURNAL BMC Biotechnol. 16 (1), 30 (2016)
PUBMED 27006073
REFERENCE 2 (bases 1 to 14499)
AUTHORS Linger RJ, Belikoff EJ, Yan Y, Li F, Wantuch HA, Fitzsimons HL,
Scott MJ.
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2015) Entomology, North Carolina State University,
112 Derieux Place, Raleigh, NC 27695-7614, USA
REFERENCE 3 (bases 1 to 14499)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..14499
/organism="Cloning vector DR4"
/mol_type="other DNA"
/db_xref="taxon:1816176"
regulatory complement(5..850)
/regulatory_class="polyA_signal_sequence"
/note="SV40 pA"
polyA_signal 12..133
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
CDS complement(558..578)
/codon_start=1
/product="nuclear localization signal of SV40 (simian virus
40) large T antigen"
/label=SV40 NLS
/translation="PKKKRKV"
intron 708..773
/label=small t intron
/note="SV40 (simian virus 40) small t antigen intron"
CDS complement(858..1874)
/codon_start=1
/product="tTAv"
/label=tTAv
/protein_id="AMQ78453.1"
/translation="MVSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWH
VKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLGT
RPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERETPT
TDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGSGPAYSRARTKNNYG
STIEGLLDLPDDDAPEEAGLAAPRLSFLPAGHTRRLSTAPPTDVSLGDELHLDGEDVAM
AHADALDDFDLDMLGDGDSPGPGFTPHDSAPYGALDMADFEFEQMFTDALGIDEYGG"
CDS complement(861..1094)
/codon_start=1
/gene="UL48"
/product="transcriptional activation domain of herpes
simplex virus protein VP16 (Triezenberg et al., 1988;
Cousens et al., 1989)"
/label=VP16 AD
/translation="APPTDVSLGDELHLDGEDVAMAHADALDDFDLDMLGDGDSPGPGF
TPHDSAPYGALDMADFEFEQMFTDALGIDEYGG"
regulatory complement(1885..4895)
/regulatory_class="promoter"
/note="Chhsp83"
regulatory 4896..7109
/regulatory_class="promoter"
/note="Lchsp83"
CDS 7110..7805
/codon_start=1
/product="ZsGreen"
/label=ZsGreen
/protein_id="AMQ78454.1"
/translation="MAQSKHGLTKEMTMKYRMEGCVDGHKFVITGEGIGYPFKGKQAIN
LCVVEGGPLPFAEDILSAAFMYGNRVFTEYPQDIADYFKNSCPAGYTWDRSFLFEDGAV
CICNADITVSVEENCMYHESKFYGVNFPADGPVMKKMTDNWEPSCEKIIPVPKQGILKG
DVSMYLLLKDGGRLRCQFDTVYKAKSVPRKMPDWHFIQHKLTREDRSDAKNQKWHLTEH
AIASGSALP"
regulatory 7812..9229
/regulatory_class="polyA_signal_sequence"
/note="Lctub pA"
misc_recomb 9232..9489
/label=phiC31 attP
/note="phiC31 attP"
protein_bind 9295..9394
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
mobile_element 9527..10209
/mobile_element_type="transposon:pBAC"
primer_bind complement(10387..10403)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 10411..10427
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(10435..10465)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 10480..10501
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(10789..11377)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(11548..12408)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(12409..12513)
/gene="bla"
/label=AmpR promoter
primer_bind 12987..13003
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
mobile_element 13702..14480
/mobile_element_type="transposon:pBAC"
Linger RJ, Belikoff EJ, Yan Y, Li F, Wantuch HA, Fitzsimons HL, Scott MJ.
DR4 载体载体图谱
DR4 载体载体序列
LOCUS Exported 14499 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector DR4, complete sequence.
ACCESSION KT897710
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 14499)
AUTHORS Linger RJ, Belikoff EJ, Yan Y, Li F, Wantuch HA, Fitzsimons HL,
Scott MJ.
TITLE Towards next generation maggot debridement therapy: transgenic
Lucilia sericata larvae that produce and secrete a human growth
factor
JOURNAL BMC Biotechnol. 16 (1), 30 (2016)
PUBMED 27006073
REFERENCE 2 (bases 1 to 14499)
AUTHORS Linger RJ, Belikoff EJ, Yan Y, Li F, Wantuch HA, Fitzsimons HL,
Scott MJ.
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2015) Entomology, North Carolina State University,
112 Derieux Place, Raleigh, NC 27695-7614, USA
REFERENCE 3 (bases 1 to 14499)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..14499
/organism="Cloning vector DR4"
/mol_type="other DNA"
/db_xref="taxon:1816176"
regulatory complement(5..850)
/regulatory_class="polyA_signal_sequence"
/note="SV40 pA"
polyA_signal 12..133
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
CDS complement(558..578)
/codon_start=1
/product="nuclear localization signal of SV40 (simian virus
40) large T antigen"
/label=SV40 NLS
/translation="PKKKRKV"
intron 708..773
/label=small t intron
/note="SV40 (simian virus 40) small t antigen intron"
CDS complement(858..1874)
/codon_start=1
/product="tTAv"
/label=tTAv
/protein_id="AMQ78453.1"
/translation="MVSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWH
VKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLGT
RPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERETPT
TDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGSGPAYSRARTKNNYG
STIEGLLDLPDDDAPEEAGLAAPRLSFLPAGHTRRLSTAPPTDVSLGDELHLDGEDVAM
AHADALDDFDLDMLGDGDSPGPGFTPHDSAPYGALDMADFEFEQMFTDALGIDEYGG"
CDS complement(861..1094)
/codon_start=1
/gene="UL48"
/product="transcriptional activation domain of herpes
simplex virus protein VP16 (Triezenberg et al., 1988;
Cousens et al., 1989)"
/label=VP16 AD
/translation="APPTDVSLGDELHLDGEDVAMAHADALDDFDLDMLGDGDSPGPGF
TPHDSAPYGALDMADFEFEQMFTDALGIDEYGG"
regulatory complement(1885..4895)
/regulatory_class="promoter"
/note="Chhsp83"
regulatory 4896..7109
/regulatory_class="promoter"
/note="Lchsp83"
CDS 7110..7805
/codon_start=1
/product="ZsGreen"
/label=ZsGreen
/protein_id="AMQ78454.1"
/translation="MAQSKHGLTKEMTMKYRMEGCVDGHKFVITGEGIGYPFKGKQAIN
LCVVEGGPLPFAEDILSAAFMYGNRVFTEYPQDIADYFKNSCPAGYTWDRSFLFEDGAV
CICNADITVSVEENCMYHESKFYGVNFPADGPVMKKMTDNWEPSCEKIIPVPKQGILKG
DVSMYLLLKDGGRLRCQFDTVYKAKSVPRKMPDWHFIQHKLTREDRSDAKNQKWHLTEH
AIASGSALP"
regulatory 7812..9229
/regulatory_class="polyA_signal_sequence"
/note="Lctub pA"
misc_recomb 9232..9489
/label=phiC31 attP
/note="phiC31 attP"
protein_bind 9295..9394
/label=phage phi-C31 attP
/bound_moiety="phage phi-C31 integrase"
/note="attachment site of phage phi-C31"
mobile_element 9527..10209
/mobile_element_type="transposon:pBAC"
primer_bind complement(10387..10403)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 10411..10427
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(10435..10465)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 10480..10501
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(10789..11377)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(11548..12408)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/label=AmpR
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(12409..12513)
/gene="bla"
/label=AmpR promoter
primer_bind 12987..13003
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
mobile_element 13702..14480
/mobile_element_type="transposon:pBAC"