LOCUS Exported 7156 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector DBH-p2a-FLPo, complete sequence.
ACCESSION KX151729
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7156)
AUTHORS Sun JJ, Ray R.
TITLE Generation of Two Noradrenergic-Specific
Dopamine-Beta-Hydroxylase-FLPo Knock-In Mice Using
CRISPR/Cas9-Mediated Targeting in Embryonic Stem Cells
JOURNAL PLoS ONE 11 (7), E0159474 (2016)
PUBMED 27441631
REFERENCE 2 (bases 1 to 7156)
AUTHORS Sun JJ, Ray R.
TITLE Direct Submission
JOURNAL Submitted (27-APR-2016) Neuroscience, Baylor College of Medicine,
One Baylor Plaza Room T707, Houston, TX 77030, USA
REFERENCE 3 (bases 1 to 7156)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7156
/organism="Cloning vector DBH-p2a-FLPo"
/mol_type="other DNA"
/db_xref="taxon:1883128"
rep_origin 1..827
/label=p15a origin
/note="p15a origin"
rep_origin 18..562
/direction=RIGHT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
misc_feature 836..1835
/label=5 homology arm
/note="5 homology arm"
misc_feature 1836..1901
/label=p2a linker
/note="p2a linker"
CDS 1845..1901
/codon_start=1
/product="2A peptide from porcine teschovirus-1
polyprotein"
/label=P2A
/note="Eukaryotic ribosomes fail to insert a peptide bond
between the Gly and Pro residues, yielding separate
polypeptides."
/translation="ATNFSLLKQAGDVEENPGP"
CDS 1902..3200
/codon_start=1
/product="FLPo"
/label=FLPo
/protein_id="ANW61891.1"
/translation="MAPKKKRKVMSQFDILCKTPPKVLVRQFVERFERPSGEKIASCAA
ELTYLCWMITHNGTAIKRATFMSYNTIISNSLSFDIVNKSLQFKYKTQKATILEASLKK
LIPAWEFTIIPYNGQKHQSDITDIVSSLQLQFESSEEADKGNSHSKKMLKALLSEGESI
WEITEKILNSFEYTSRFTKTKTLYQFLFLATFINCGRFSDIKNVDPKSFKLVQNKYLGV
IIQCLVTETKTSVSRHIYFFSARGRIDPLVYLDEFLRNSEPVLKRVNRTGNSSSNKQEY
QLLKDNLVRSYNKALKKNAPYPIFAIKNGPKSHIGRHLMTSFLSMKGLTELTNVVGNWS
DKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPIEEWQHIEQL
KGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI"
misc_feature 3201..3234
/label=Lox2722
/note="Lox2722"
protein_bind complement(3201..3234)
/label=lox2272
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GGATACTT). lox2272 sites are compatible with each
other, but incompatible with loxP or loxN sites."
regulatory 3235..3749
/regulatory_class="promoter"
/note="PGK"
promoter 3241..3740
/label=PGK promoter
/note="mouse phosphoglycerate kinase 1 promoter"
regulatory 3752..3817
/regulatory_class="promoter"
/note="EM7"
promoter 3752..3799
/label=EM7 promoter
/note="synthetic bacterial promoter "
CDS 3818..4621
/codon_start=1
/product="NeoR"
/label=NeoR
/protein_id="ANW61892.1"
/translation="MGSAIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQ
GRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD
LLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE
EHQGLAPAELFARLKARMPDGDDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQ
DIALATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
regulatory 4635..4937
/regulatory_class="other"
/note="bghpA"
polyA_signal 4659..4883
/label=bGH poly(A) signal
/note="bovine growth hormone polyadenylation signal"
misc_feature 4938..4971
/label=Lox2722
/note="Lox2722"
protein_bind complement(4938..4971)
/label=lox2272
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GGATACTT). lox2272 sites are compatible with each
other, but incompatible with loxP or loxN sites."
misc_feature 4972..5968
/label=3 homology arm with PAM motif deleted
/note="3 homology arm with PAM motif deleted"
promoter 6044..6148
/gene="bla"
/label=AmpR promoter
CDS 6149..7009
/codon_start=1
/product="AmpR"
/label=AmpR
/protein_id="ANW61890.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
LOCUS Exported 7156 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector DBH-p2a-FLPo, complete sequence.
ACCESSION KX151729
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7156)
AUTHORS Sun JJ, Ray R.
TITLE Generation of Two Noradrenergic-Specific
Dopamine-Beta-Hydroxylase-FLPo Knock-In Mice Using
CRISPR/Cas9-Mediated Targeting in Embryonic Stem Cells
JOURNAL PLoS ONE 11 (7), E0159474 (2016)
PUBMED 27441631
REFERENCE 2 (bases 1 to 7156)
AUTHORS Sun JJ, Ray R.
TITLE Direct Submission
JOURNAL Submitted (27-APR-2016) Neuroscience, Baylor College of Medicine,
One Baylor Plaza Room T707, Houston, TX 77030, USA
REFERENCE 3 (bases 1 to 7156)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7156
/organism="Cloning vector DBH-p2a-FLPo"
/mol_type="other DNA"
/db_xref="taxon:1883128"
rep_origin 1..827
/label=p15a origin
/note="p15a origin"
rep_origin 18..562
/direction=RIGHT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
misc_feature 836..1835
/label=5 homology arm
/note="5 homology arm"
misc_feature 1836..1901
/label=p2a linker
/note="p2a linker"
CDS 1845..1901
/codon_start=1
/product="2A peptide from porcine teschovirus-1
polyprotein"
/label=P2A
/note="Eukaryotic ribosomes fail to insert a peptide bond
between the Gly and Pro residues, yielding separate
polypeptides."
/translation="ATNFSLLKQAGDVEENPGP"
CDS 1902..3200
/codon_start=1
/product="FLPo"
/label=FLPo
/protein_id="ANW61891.1"
/translation="MAPKKKRKVMSQFDILCKTPPKVLVRQFVERFERPSGEKIASCAA
ELTYLCWMITHNGTAIKRATFMSYNTIISNSLSFDIVNKSLQFKYKTQKATILEASLKK
LIPAWEFTIIPYNGQKHQSDITDIVSSLQLQFESSEEADKGNSHSKKMLKALLSEGESI
WEITEKILNSFEYTSRFTKTKTLYQFLFLATFINCGRFSDIKNVDPKSFKLVQNKYLGV
IIQCLVTETKTSVSRHIYFFSARGRIDPLVYLDEFLRNSEPVLKRVNRTGNSSSNKQEY
QLLKDNLVRSYNKALKKNAPYPIFAIKNGPKSHIGRHLMTSFLSMKGLTELTNVVGNWS
DKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPIEEWQHIEQL
KGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI"
misc_feature 3201..3234
/label=Lox2722
/note="Lox2722"
protein_bind complement(3201..3234)
/label=lox2272
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GGATACTT). lox2272 sites are compatible with each
other, but incompatible with loxP or loxN sites."
regulatory 3235..3749
/regulatory_class="promoter"
/note="PGK"
promoter 3241..3740
/label=PGK promoter
/note="mouse phosphoglycerate kinase 1 promoter"
regulatory 3752..3817
/regulatory_class="promoter"
/note="EM7"
promoter 3752..3799
/label=EM7 promoter
/note="synthetic bacterial promoter "
CDS 3818..4621
/codon_start=1
/product="NeoR"
/label=NeoR
/protein_id="ANW61892.1"
/translation="MGSAIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQ
GRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD
LLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE
EHQGLAPAELFARLKARMPDGDDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQ
DIALATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
regulatory 4635..4937
/regulatory_class="other"
/note="bghpA"
polyA_signal 4659..4883
/label=bGH poly(A) signal
/note="bovine growth hormone polyadenylation signal"
misc_feature 4938..4971
/label=Lox2722
/note="Lox2722"
protein_bind complement(4938..4971)
/label=lox2272
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GGATACTT). lox2272 sites are compatible with each
other, but incompatible with loxP or loxN sites."
misc_feature 4972..5968
/label=3 homology arm with PAM motif deleted
/note="3 homology arm with PAM motif deleted"
promoter 6044..6148
/gene="bla"
/label=AmpR promoter
CDS 6149..7009
/codon_start=1
/product="AmpR"
/label=AmpR
/protein_id="ANW61890.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"