LOCUS Exported 3964 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector 35SCoreTIF1-pFLEV, complete sequence.
ACCESSION KX814442
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3964)
AUTHORS Grant TN, De La Torre CM, Zhang N, Finer JJ.
TITLE Synthetic introns help identify sequences in the 5 UTR intron of
the Glycine max polyubiquitin (Gmubi) promoter that give increased
promoter activity
JOURNAL Planta (2017) In press
PUBMED 28070655
REFERENCE 2 (bases 1 to 3964)
AUTHORS Finer J, Grant T, De La Torre C, Zhang N.
TITLE Direct Submission
JOURNAL Submitted (02-SEP-2016) Horticulture and Crop Science, Ohio State
University, 1680 Madison Ave, Wooster, OH 44691, USA
REFERENCE 3 (bases 1 to 3964)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3964
/organism="Cloning vector 35SCoreTIF1-pFLEV"
/mol_type="other DNA"
/db_xref="taxon:1955483"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 619..665
/label=minimal CaMV 35S promoter
/note="minimal 35S promoter from cauliflower mosaic virus"
regulatory 678..687
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS 684..1403
/codon_start=1
/product="sGTF65T"
/label=sGTF65T
/protein_id="AQM73592.1"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTFTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITHGMDELYK"
regulatory 1436..1711
/regulatory_class="terminator"
/note="NOS terminator"
terminator 1436..1688
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
primer_bind complement(1743..1759)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1767..1783
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1791..1821)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1836..1857
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2145..2733)
/direction=LEFT
gene complement(2904..3764)
/gene="ampR"
/label=ampR
CDS complement(2904..3764)
/codon_start=1
/gene="ampR"
/product="ampicillin resistance protein"
/label=ampR
/protein_id="AQM73591.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3765..3869)
/gene="bla"
/label=AmpR promoter
LOCUS Exported 3964 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector 35SCoreTIF1-pFLEV, complete sequence.
ACCESSION KX814442
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3964)
AUTHORS Grant TN, De La Torre CM, Zhang N, Finer JJ.
TITLE Synthetic introns help identify sequences in the 5 UTR intron of
the Glycine max polyubiquitin (Gmubi) promoter that give increased
promoter activity
JOURNAL Planta (2017) In press
PUBMED 28070655
REFERENCE 2 (bases 1 to 3964)
AUTHORS Finer J, Grant T, De La Torre C, Zhang N.
TITLE Direct Submission
JOURNAL Submitted (02-SEP-2016) Horticulture and Crop Science, Ohio State
University, 1680 Madison Ave, Wooster, OH 44691, USA
REFERENCE 3 (bases 1 to 3964)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3964
/organism="Cloning vector 35SCoreTIF1-pFLEV"
/mol_type="other DNA"
/db_xref="taxon:1955483"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 619..665
/label=minimal CaMV 35S promoter
/note="minimal 35S promoter from cauliflower mosaic virus"
regulatory 678..687
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS 684..1403
/codon_start=1
/product="sGTF65T"
/label=sGTF65T
/protein_id="AQM73592.1"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTFTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
VNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITHGMDELYK"
regulatory 1436..1711
/regulatory_class="terminator"
/note="NOS terminator"
terminator 1436..1688
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
primer_bind complement(1743..1759)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 1767..1783
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1791..1821)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 1836..1857
/label=CAP binding site
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(2145..2733)
/direction=LEFT
gene complement(2904..3764)
/gene="ampR"
/label=ampR
CDS complement(2904..3764)
/codon_start=1
/gene="ampR"
/product="ampicillin resistance protein"
/label=ampR
/protein_id="AQM73591.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3765..3869)
/gene="bla"
/label=AmpR promoter