LOCUS Exported 4887 bp ds-DNA circular SYN 29-11-2013
DEFINITION Yeast centromere vector with a URA3 marker and an MCS derived from
pBLUESCRIPT.
ACCESSION U03442
VERSION .
KEYWORDS pRS316
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4887)
AUTHORS Sikorski RS, Hieter P.
TITLE A system of shuttle vectors and yeast host strains designed for
efficient manipulation of DNA in Saccharomyces cerevisiae.
JOURNAL Genetics 1989;122:19-27.
PUBMED 2659436
REFERENCE 2 (bases 1 to 4887)
AUTHORS .
TITLE Direct Submission
COMMENT
FEATURES Location/Qualifiers
source 1..4887
/organism="synthetic DNA construct"
/lab_host="Saccharomyces cerevisiae"
/mol_type="other DNA"
promoter 190..410
/gene="S. cerevisiae URA3"
/note="URA3 promoter"
CDS 411..1214
/codon_start=1
/gene="S. cerevisiae URA3"
/product="orotidine-5-phosphate decarboxylase, required
for uracil biosynthesis"
/note="URA3"
/note="yeast auxotrophic marker, counterselectable with
5-fluoroorotic acid (5-FOA)"
/translation="MSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELL
ELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQ
YSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLSTGE
YTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDD
VVSTGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN"
rep_origin complement(1343..1798)
/direction=LEFT
/note="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
CDS complement(1581..2156)
/codon_start=1
/gene="lacZ fragment"
/product="fragment of beta-galactosidase"
/note="lacZ"
/translation="MTMITPSSELTLTKGNKSWVPGPPSRSTVSISLISNSCSPGDPLV
LERPPPRWSSNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEART
DRPSQQLRSLNGEWRDAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFAG
FPRQALNRGLPLGFRFSALRHLDPKKLD"
primer_bind 1943..1959
/note="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 1966..1984
/note="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 1993..2100
/note="MCS"
/note="pBluescript multiple cloning site"
promoter complement(2113..2131)
/note="T3 promoter"
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2152..2168)
/note="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2176..2192
/bound_moiety="lac repressor encoded by lacI"
/note="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2200..2230)
/note="lac promoter"
/note="promoter for the E. coli lac operon"
rep_origin complement(2554..3142)
/direction=LEFT
/note="ori"
/note="high-copy-number colE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3313..4173)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFFHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4174..4278)
/gene="bla"
/note="AmpR promoter"
misc_feature 4315..4818
/note="CEN/ARS"
/note="S. cerevisiae CEN6 centromere fused to an
autonomously replicating sequence"
LOCUS Exported 4887 bp ds-DNA circular SYN 29-11-2013
DEFINITION Yeast centromere vector with a URA3 marker and an MCS derived from
pBLUESCRIPT.
ACCESSION U03442
VERSION .
KEYWORDS pRS316
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4887)
AUTHORS Sikorski RS, Hieter P.
TITLE A system of shuttle vectors and yeast host strains designed for
efficient manipulation of DNA in Saccharomyces cerevisiae.
JOURNAL Genetics 1989;122:19-27.
PUBMED 2659436
REFERENCE 2 (bases 1 to 4887)
AUTHORS .
TITLE Direct Submission
COMMENT
FEATURES Location/Qualifiers
source 1..4887
/organism="synthetic DNA construct"
/lab_host="Saccharomyces cerevisiae"
/mol_type="other DNA"
promoter 190..410
/gene="S. cerevisiae URA3"
/note="URA3 promoter"
CDS 411..1214
/codon_start=1
/gene="S. cerevisiae URA3"
/product="orotidine-5-phosphate decarboxylase, required
for uracil biosynthesis"
/note="URA3"
/note="yeast auxotrophic marker, counterselectable with
5-fluoroorotic acid (5-FOA)"
/translation="MSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELL
ELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQ
YSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLSTGE
YTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDD
VVSTGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN"
rep_origin complement(1343..1798)
/direction=LEFT
/note="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
CDS complement(1581..2156)
/codon_start=1
/gene="lacZ fragment"
/product="fragment of beta-galactosidase"
/note="lacZ"
/translation="MTMITPSSELTLTKGNKSWVPGPPSRSTVSISLISNSCSPGDPLV
LERPPPRWSSNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEART
DRPSQQLRSLNGEWRDAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFAG
FPRQALNRGLPLGFRFSALRHLDPKKLD"
primer_bind 1943..1959
/note="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 1966..1984
/note="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature 1993..2100
/note="MCS"
/note="pBluescript multiple cloning site"
promoter complement(2113..2131)
/note="T3 promoter"
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(2152..2168)
/note="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 2176..2192
/bound_moiety="lac repressor encoded by lacI"
/note="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(2200..2230)
/note="lac promoter"
/note="promoter for the E. coli lac operon"
rep_origin complement(2554..3142)
/direction=LEFT
/note="ori"
/note="high-copy-number colE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3313..4173)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFFHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(4174..4278)
/gene="bla"
/note="AmpR promoter"
misc_feature 4315..4818
/note="CEN/ARS"
/note="S. cerevisiae CEN6 centromere fused to an
autonomously replicating sequence"