LOCUS Exported 8157 bp ds-DNA circular SYN 28-1-2014
DEFINITION Lentiviral vector encoding a doxycycline-inducible FKBP
homodimerizer domain, for creating soluble fusion proteins that can
be dimerized with a drug.
ACCESSION .
VERSION .
KEYWORDS pLVX-TRE3G-Hom1
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8157)
AUTHORS Clontech
TITLE Direct Submission
COMMENT
FEATURES Location/Qualifiers
source 1..8157
/organism="synthetic DNA construct"
/lab_host="Mammalian Cells"
/mol_type="other DNA"
LTR 1..634
/note="5 LTR"
/note="5 long terminal repeat (LTR) from HIV-1"
misc_feature 681..806
/note="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1303..1536
/note="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
misc_feature 2028..2144
/note="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1 (lacking the first T)"
promoter 2206..2555
/note="TRE3GV promoter"
/note="3rd-generation Tet-responsive promoter that can be
activated by binding of Tet-On(R) 3G, optimized for
retroviral and lentiviral vectors"
protein_bind 2214..2232
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2250..2268
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2286..2304
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2322..2340
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2358..2376
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2394..2412
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2430..2448
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
misc_feature 2556..2575
/note="5 MCS"
/note="multiple cloning site upstream of DmrB"
CDS 2576..2578
/codon_start=1
/product="start codon"
/note="ATG"
/translation="M"
CDS 2588..2908
/codon_start=1
/product="F36V mutant of FK506-binding protein FKBP12"
/note="DmrB"
/note="binds synthetic ligands that do not bind wild-type
FKBP"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKVDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
misc_feature 2909..2926
/note="3 MCS"
/note="multiple cloning site downstream of DmrB"
promoter 2942..3441
/note="PGK promoter"
/note="mouse phosphoglycerate kinase 1 promoter"
CDS 3462..4061
/codon_start=1
/gene="pac from Streptomyces alboniger"
/product="puromycin N-acetyltransferase"
/note="PuroR"
/note="confers resistance to puromycin"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
misc_feature 4079..4667
/note="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 4875..5508
/note="3 LTR"
/note="3 long terminal repeat (LTR) from HIV-1"
rep_origin complement(6039..6624)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6795..7655)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(7656..7760)
/gene="bla"
/note="AmpR promoter"
polyA_signal 7808..7942
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
LOCUS Exported 8157 bp ds-DNA circular SYN 28-1-2014
DEFINITION Lentiviral vector encoding a doxycycline-inducible FKBP
homodimerizer domain, for creating soluble fusion proteins that can
be dimerized with a drug.
ACCESSION .
VERSION .
KEYWORDS pLVX-TRE3G-Hom1
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8157)
AUTHORS Clontech
TITLE Direct Submission
COMMENT
FEATURES Location/Qualifiers
source 1..8157
/organism="synthetic DNA construct"
/lab_host="Mammalian Cells"
/mol_type="other DNA"
LTR 1..634
/note="5 LTR"
/note="5 long terminal repeat (LTR) from HIV-1"
misc_feature 681..806
/note="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1303..1536
/note="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
misc_feature 2028..2144
/note="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1 (lacking the first T)"
promoter 2206..2555
/note="TRE3GV promoter"
/note="3rd-generation Tet-responsive promoter that can be
activated by binding of Tet-On(R) 3G, optimized for
retroviral and lentiviral vectors"
protein_bind 2214..2232
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2250..2268
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2286..2304
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2322..2340
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2358..2376
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2394..2412
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
protein_bind 2430..2448
/gene="tetO"
/bound_moiety="tetracycline repressor TetR"
/note="tet operator"
/note="bacterial operator O2 for the tetR and tetA genes"
misc_feature 2556..2575
/note="5 MCS"
/note="multiple cloning site upstream of DmrB"
CDS 2576..2578
/codon_start=1
/product="start codon"
/note="ATG"
/translation="M"
CDS 2588..2908
/codon_start=1
/product="F36V mutant of FK506-binding protein FKBP12"
/note="DmrB"
/note="binds synthetic ligands that do not bind wild-type
FKBP"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKVDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
misc_feature 2909..2926
/note="3 MCS"
/note="multiple cloning site downstream of DmrB"
promoter 2942..3441
/note="PGK promoter"
/note="mouse phosphoglycerate kinase 1 promoter"
CDS 3462..4061
/codon_start=1
/gene="pac from Streptomyces alboniger"
/product="puromycin N-acetyltransferase"
/note="PuroR"
/note="confers resistance to puromycin"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
misc_feature 4079..4667
/note="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 4875..5508
/note="3 LTR"
/note="3 long terminal repeat (LTR) from HIV-1"
rep_origin complement(6039..6624)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6795..7655)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(7656..7760)
/gene="bla"
/note="AmpR promoter"
polyA_signal 7808..7942
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"