LOCUS Exported 9550 bp ds-DNA circular SYN 01-2-2014
DEFINITION Lentiviral vector encoding four FKBP homodimerizer domains, for
creating ER-localized oligomers that can be dissociated with a drug.
ACCESSION .
VERSION .
KEYWORDS pLVX-rHom-Sec1
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9550)
AUTHORS Clontech
TITLE Direct Submission
COMMENT
FEATURES Location/Qualifiers
source 1..9550
/organism="synthetic DNA construct"
/lab_host="Mammalian Cells"
/mol_type="other DNA"
LTR 1..634
/note="3 LTR"
/note="3 long terminal repeat (LTR) from HIV-1"
misc_feature 681..806
/note="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1303..1536
/note="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
misc_feature 2028..2144
/note="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1 (lacking the first T)"
enhancer 2201..2504
/note="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 2505..2708
/note="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
misc_feature 2804..2815
/note="5 MCS"
/note="multiple cloning site upstream of DmrD"
CDS 2822..2899
/codon_start=1
/product="human growth hormone signal sequence"
/label="Signal sequence"
/note="hGH signal sequence"
/translation="MATGSRTSLLLAFGLLCLPWLQEGSA"
CDS 2906..3226
/codon_start=1
/product="dimeric F36M mutant of FK506-binding protein
FKBP12"
/note="DmrD"
/note="dimerization can be reversed by ligand binding"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKMDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
CDS 3233..3553
/codon_start=1
/product="dimeric F36M mutant of FK506-binding protein
FKBP12"
/note="DmrD"
/note="dimerization can be reversed by ligand binding"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKMDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
CDS 3560..3880
/codon_start=1
/product="dimeric F36M mutant of FK506-binding protein
FKBP12"
/note="DmrD"
/note="dimerization can be reversed by ligand binding"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKMDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
CDS 3887..4207
/codon_start=1
/product="dimeric F36M mutant of FK506-binding protein
FKBP12"
/note="DmrD"
/note="dimerization can be reversed by ligand binding"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKMDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
misc_feature 4227..4240
/note="3 MCS"
/note="multiple cloning site downstream of DmrD"
misc_feature 4253..4826
/note="IRES"
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 4859..5458
/codon_start=1
/gene="pac from Streptomyces alboniger"
/product="puromycin N-acetyltransferase"
/note="PuroR"
/note="confers resistance to puromycin"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
misc_feature 5472..6060
/note="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 6268..6901
/note="3 LTR"
/note="3 long terminal repeat (LTR) from HIV-1"
rep_origin complement(7432..8017)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(8188..9048)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(9049..9153)
/gene="bla"
/note="AmpR promoter"
polyA_signal 9201..9335
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
LOCUS Exported 9550 bp ds-DNA circular SYN 01-2-2014
DEFINITION Lentiviral vector encoding four FKBP homodimerizer domains, for
creating ER-localized oligomers that can be dissociated with a drug.
ACCESSION .
VERSION .
KEYWORDS pLVX-rHom-Sec1
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9550)
AUTHORS Clontech
TITLE Direct Submission
COMMENT
FEATURES Location/Qualifiers
source 1..9550
/organism="synthetic DNA construct"
/lab_host="Mammalian Cells"
/mol_type="other DNA"
LTR 1..634
/note="3 LTR"
/note="3 long terminal repeat (LTR) from HIV-1"
misc_feature 681..806
/note="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1303..1536
/note="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
misc_feature 2028..2144
/note="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1 (lacking the first T)"
enhancer 2201..2504
/note="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 2505..2708
/note="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
misc_feature 2804..2815
/note="5 MCS"
/note="multiple cloning site upstream of DmrD"
CDS 2822..2899
/codon_start=1
/product="human growth hormone signal sequence"
/label="Signal sequence"
/note="hGH signal sequence"
/translation="MATGSRTSLLLAFGLLCLPWLQEGSA"
CDS 2906..3226
/codon_start=1
/product="dimeric F36M mutant of FK506-binding protein
FKBP12"
/note="DmrD"
/note="dimerization can be reversed by ligand binding"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKMDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
CDS 3233..3553
/codon_start=1
/product="dimeric F36M mutant of FK506-binding protein
FKBP12"
/note="DmrD"
/note="dimerization can be reversed by ligand binding"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKMDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
CDS 3560..3880
/codon_start=1
/product="dimeric F36M mutant of FK506-binding protein
FKBP12"
/note="DmrD"
/note="dimerization can be reversed by ligand binding"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKMDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
CDS 3887..4207
/codon_start=1
/product="dimeric F36M mutant of FK506-binding protein
FKBP12"
/note="DmrD"
/note="dimerization can be reversed by ligand binding"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKMDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
misc_feature 4227..4240
/note="3 MCS"
/note="multiple cloning site downstream of DmrD"
misc_feature 4253..4826
/note="IRES"
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 4859..5458
/codon_start=1
/gene="pac from Streptomyces alboniger"
/product="puromycin N-acetyltransferase"
/note="PuroR"
/note="confers resistance to puromycin"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
misc_feature 5472..6060
/note="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 6268..6901
/note="3 LTR"
/note="3 long terminal repeat (LTR) from HIV-1"
rep_origin complement(7432..8017)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(8188..9048)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(9049..9153)
/gene="bla"
/note="AmpR promoter"
polyA_signal 9201..9335
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"