LOCUS Exported 8499 bp ds-DNA circular SYN 28-1-2014
DEFINITION Lentiviral vector encoding an FKBP homodimerizer domain, for
creating nuclear fusion proteins that can be dimerized with a drug.
ACCESSION .
VERSION .
KEYWORDS pLVX-Hom-Nuc1
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8499)
AUTHORS Clontech
TITLE Direct Submission
COMMENT
FEATURES Location/Qualifiers
source 1..8499
/organism="synthetic DNA construct"
/lab_host="Mammalian Cells"
/mol_type="other DNA"
LTR 1..634
/note="3 LTR"
/note="3 long terminal repeat (LTR) from HIV-1"
misc_feature 681..806
/note="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1303..1536
/note="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
misc_feature 2028..2144
/note="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1 (lacking the first T)"
enhancer 2201..2504
/note="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 2505..2708
/note="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
misc_feature 2803..2820
/note="5 MCS"
/note="multiple cloning site upstream of DmrB"
CDS 2821..2823
/codon_start=1
/product="start codon"
/note="ATG"
/translation="M"
CDS 2824..2844
/codon_start=1
/locus_tag="
"
/product="nuclear localization signal of SV40 large T
antigen"
/note="SV40 NLS"
/note="
"
/protein_id="
"
/translation="PKKKRKV"
CDS 2854..3174
/codon_start=1
/product="F36V mutant of FK506-binding protein FKBP12"
/note="DmrB"
/note="binds synthetic ligands that do not bind wild-type
FKBP"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKVDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
misc_feature 3176..3189
/note="3 MCS"
/note="multiple cloning site downstream of DmrB"
misc_feature 3202..3775
/note="IRES"
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 3808..4407
/codon_start=1
/gene="pac from Streptomyces alboniger"
/product="puromycin N-acetyltransferase"
/note="PuroR"
/note="confers resistance to puromycin"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
misc_feature 4421..5009
/note="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 5217..5850
/note="3 LTR"
/note="3 long terminal repeat (LTR) from HIV-1"
rep_origin complement(6381..6966)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(7137..7997)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(7998..8102)
/gene="bla"
/note="AmpR promoter"
polyA_signal 8150..8284
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
LOCUS Exported 8499 bp ds-DNA circular SYN 28-1-2014
DEFINITION Lentiviral vector encoding an FKBP homodimerizer domain, for
creating nuclear fusion proteins that can be dimerized with a drug.
ACCESSION .
VERSION .
KEYWORDS pLVX-Hom-Nuc1
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8499)
AUTHORS Clontech
TITLE Direct Submission
COMMENT
FEATURES Location/Qualifiers
source 1..8499
/organism="synthetic DNA construct"
/lab_host="Mammalian Cells"
/mol_type="other DNA"
LTR 1..634
/note="3 LTR"
/note="3 long terminal repeat (LTR) from HIV-1"
misc_feature 681..806
/note="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1303..1536
/note="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
misc_feature 2028..2144
/note="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1 (lacking the first T)"
enhancer 2201..2504
/note="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 2505..2708
/note="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
misc_feature 2803..2820
/note="5 MCS"
/note="multiple cloning site upstream of DmrB"
CDS 2821..2823
/codon_start=1
/product="start codon"
/note="ATG"
/translation="M"
CDS 2824..2844
/codon_start=1
/locus_tag="
"
/product="nuclear localization signal of SV40 large T
antigen"
/note="SV40 NLS"
/note="
"
/protein_id="
"
/translation="PKKKRKV"
CDS 2854..3174
/codon_start=1
/product="F36V mutant of FK506-binding protein FKBP12"
/note="DmrB"
/note="binds synthetic ligands that do not bind wild-type
FKBP"
/translation="GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKVDSSRDRNKP
FKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL
KLE"
misc_feature 3176..3189
/note="3 MCS"
/note="multiple cloning site downstream of DmrB"
misc_feature 3202..3775
/note="IRES"
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 3808..4407
/codon_start=1
/gene="pac from Streptomyces alboniger"
/product="puromycin N-acetyltransferase"
/note="PuroR"
/note="confers resistance to puromycin"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
misc_feature 4421..5009
/note="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 5217..5850
/note="3 LTR"
/note="3 long terminal repeat (LTR) from HIV-1"
rep_origin complement(6381..6966)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(7137..7997)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(7998..8102)
/gene="bla"
/note="AmpR promoter"
polyA_signal 8150..8284
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"