LOCUS Exported 6336 bp ds-DNA circular SYN 22-3-2014
DEFINITION Flexi(R) Vector with the sacB gene, for in vitro transcription and
translation of an N-terminally 6xHis-tagged protein.
ACCESSION .
VERSION .
KEYWORDS pEU-HSBC
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6336)
AUTHORS Vinarov DA, Lytle BL, Peterson FC, Tyler EM, Volkman BF, Markley JL.
TITLE Cell-free protein production and labeling protocol for NMR-based
structural proteomics.
JOURNAL Nat. Methods 2004;1:149-53.
PUBMED 15782178
REFERENCE 2 (bases 1 to 6336)
AUTHORS Center for Eukaryotic Structural Genomics
TITLE Direct Submission
COMMENT To remove the sacB gene, insert an ORF between the SgfI site and the
PmeI site or a downstream site.
FEATURES Location/Qualifiers
source 1..6336
/organism="synthetic DNA construct"
/lab_host="Escherichia coli"
/mol_type="other DNA"
promoter 373..391
/note="SP6 promoter"
/note="promoter for bacteriophage SP6 RNA polymerase"
CDS 521..523
/codon_start=1
/product="start codon"
/note="ATG"
/translation="M"
CDS 527..544
/codon_start=1
/product="6xHis affinity tag"
/note="6xHis"
/translation="HHHHHH"
CDS 790..2211
/codon_start=1
/gene="Bacillus subtilis sacB"
/product="secreted levansucrase that renders bacterial
growth sensitive to sucrose"
/note="SacB"
/note="negative selection marker"
/protein_id="
"
/translation="MNIKKFAKQATVLTFTTALLAGGATQAFAKETNQKPYKETYGISH
ITRHDMLQIPEQQKNEKYQVPEFDSSTIKNISSAKGLDVWDSWPLQNADGTVANYHGYH
IVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEW
SGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDG
KTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTEDGYQGEESLFNKA
YYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKPLIASNTVTDE
IERANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVLK
MDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYADKQSTFAPSFLLNIKGKKTSV
VKDSILEQGQLTVNK"
promoter 2297..2327
/note="lac UV5 promoter"
/note="E. coli lac promoter with an ""up"" mutation"
CDS 2381..3040
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/note="CmR"
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
primer_bind complement(3795..3811)
/note="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 3819..3835
/bound_moiety="lac repressor encoded by lacI"
/note="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3843..3873)
/note="lac promoter"
/note="promoter for the E. coli lac operon"
rep_origin complement(4197..4785)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4956..5816)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIRYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(5817..5921)
/gene="bla"
/note="AmpR promoter"
LOCUS Exported 6336 bp ds-DNA circular SYN 22-3-2014
DEFINITION Flexi(R) Vector with the sacB gene, for in vitro transcription and
translation of an N-terminally 6xHis-tagged protein.
ACCESSION .
VERSION .
KEYWORDS pEU-HSBC
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6336)
AUTHORS Vinarov DA, Lytle BL, Peterson FC, Tyler EM, Volkman BF, Markley JL.
TITLE Cell-free protein production and labeling protocol for NMR-based
structural proteomics.
JOURNAL Nat. Methods 2004;1:149-53.
PUBMED 15782178
REFERENCE 2 (bases 1 to 6336)
AUTHORS Center for Eukaryotic Structural Genomics
TITLE Direct Submission
COMMENT To remove the sacB gene, insert an ORF between the SgfI site and the
PmeI site or a downstream site.
FEATURES Location/Qualifiers
source 1..6336
/organism="synthetic DNA construct"
/lab_host="Escherichia coli"
/mol_type="other DNA"
promoter 373..391
/note="SP6 promoter"
/note="promoter for bacteriophage SP6 RNA polymerase"
CDS 521..523
/codon_start=1
/product="start codon"
/note="ATG"
/translation="M"
CDS 527..544
/codon_start=1
/product="6xHis affinity tag"
/note="6xHis"
/translation="HHHHHH"
CDS 790..2211
/codon_start=1
/gene="Bacillus subtilis sacB"
/product="secreted levansucrase that renders bacterial
growth sensitive to sucrose"
/note="SacB"
/note="negative selection marker"
/protein_id="
"
/translation="MNIKKFAKQATVLTFTTALLAGGATQAFAKETNQKPYKETYGISH
ITRHDMLQIPEQQKNEKYQVPEFDSSTIKNISSAKGLDVWDSWPLQNADGTVANYHGYH
IVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEW
SGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDG
KTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTEDGYQGEESLFNKA
YYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKPLIASNTVTDE
IERANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVLK
MDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYADKQSTFAPSFLLNIKGKKTSV
VKDSILEQGQLTVNK"
promoter 2297..2327
/note="lac UV5 promoter"
/note="E. coli lac promoter with an ""up"" mutation"
CDS 2381..3040
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/note="CmR"
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
primer_bind complement(3795..3811)
/note="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 3819..3835
/bound_moiety="lac repressor encoded by lacI"
/note="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3843..3873)
/note="lac promoter"
/note="promoter for the E. coli lac operon"
rep_origin complement(4197..4785)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4956..5816)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIRYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(5817..5921)
/gene="bla"
/note="AmpR promoter"