LOCUS Exported 4807 bp ds-DNA circular SYN 29-11-2013
DEFINITION Gateway(R) library vector for low-background cloning and transient
mammalian cell expression of cDNAs.
ACCESSION .
VERSION .
KEYWORDS pCMV SPORT6ccdB
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4807)
AUTHORS I.M.A.G.E. Consortium
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4807
/organism="synthetic DNA construct"
/lab_host="Mammalian Cells"
/mol_type="other DNA"
polyA_signal 125..259
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
primer_bind 664..680
/note="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 691..709
/note="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
protein_bind 711..735
/gene="mutant version of attB"
/bound_moiety="BP Clonase(TM)"
/note="attB2"
/note="recombination site for the Gateway(R) BP reaction"
CDS 899..1204
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/note="ccdB"
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
protein_bind complement(1239..1263)
/gene="mutant version of attB"
/bound_moiety="BP Clonase(TM)"
/note="attB1"
/note="recombination site for the Gateway(R) BP reaction"
promoter complement(1264..1282)
/note="SP6 promoter"
/note="promoter for bacteriophage SP6 RNA polymerase"
primer_bind complement(1293..1309)
/note="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(1435..1638)
/note="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
enhancer 1639..1942
/note="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
rep_origin complement(2402..2990)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3068..3101
/bound_moiety="Cre recombinase"
/note="loxP"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
CDS complement(3203..4063)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin complement(4351..4806)
/direction=LEFT
/note="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
LOCUS Exported 4807 bp ds-DNA circular SYN 29-11-2013
DEFINITION Gateway(R) library vector for low-background cloning and transient
mammalian cell expression of cDNAs.
ACCESSION .
VERSION .
KEYWORDS pCMV SPORT6ccdB
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4807)
AUTHORS I.M.A.G.E. Consortium
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..4807
/organism="synthetic DNA construct"
/lab_host="Mammalian Cells"
/mol_type="other DNA"
polyA_signal 125..259
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
primer_bind 664..680
/note="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 691..709
/note="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
protein_bind 711..735
/gene="mutant version of attB"
/bound_moiety="BP Clonase(TM)"
/note="attB2"
/note="recombination site for the Gateway(R) BP reaction"
CDS 899..1204
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/note="ccdB"
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
protein_bind complement(1239..1263)
/gene="mutant version of attB"
/bound_moiety="BP Clonase(TM)"
/note="attB1"
/note="recombination site for the Gateway(R) BP reaction"
promoter complement(1264..1282)
/note="SP6 promoter"
/note="promoter for bacteriophage SP6 RNA polymerase"
primer_bind complement(1293..1309)
/note="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(1435..1638)
/note="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
enhancer 1639..1942
/note="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
rep_origin complement(2402..2990)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 3068..3101
/bound_moiety="Cre recombinase"
/note="loxP"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
CDS complement(3203..4063)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin complement(4351..4806)
/direction=LEFT
/note="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"