LOCUS Exported 9087 bp ds-DNA circular SYN 09-11-2013
DEFINITION Lentiviral Gateway(R) destination vector for expression of
N-terminally capTEV(TM)-tagged proteins.
ACCESSION .
VERSION .
KEYWORDS pLenti6 capTEV-NT-DEST1
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9087)
AUTHORS Invitrogen (Life Technologies)
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..9087
/organism="synthetic DNA construct"
/lab_host="Mammalian Cells"
/mol_type="other DNA"
promoter 1..229
/note="RSV promoter"
/note="Rous Sarcoma Virus enhancer/promoter"
LTR 230..410
/note="5 LTR (truncated)"
/note="truncated 5 long terminal repeat (LTR) from HIV-1"
misc_feature 457..582
/note="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1075..1308
/note="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
enhancer 1872..2251
/note="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 2252..2455
/note="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
CDS 2510..2812
/codon_start=1
/product="composite tag for in vivo biotinylation, TEV
protease cleavage, and 6xHis tagging"
/note="capTEV(TM)"
/translation="MGAGTPVTAPLAGTIWKVLASEGQTVAAGEVLLILEAMKMETEIR
AAQAGTVRGIAVKAGDAVAVGDTLMTLAGSGSENLYFQGQLENLYFQGQLHHHHHH"
protein_bind 2840..2964
/gene="mutant version of attR"
/bound_moiety="LR Clonase(TM)"
/note="attR1"
/note="recombination site for the Gateway(R) LR reaction"
promoter 2989..3019
/note="lac UV5 promoter"
/note="E. coli lac promoter with an ""up"" mutation"
CDS 3073..3732
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/note="CmR"
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
CDS 4074..4379
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/note="ccdB"
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
protein_bind complement(4420..4544)
/gene="mutant version of attR"
/bound_moiety="LR Clonase(TM)"
/note="attR2"
/note="recombination site for the Gateway(R) LR reaction"
CDS 4597..4638
/codon_start=1
/product="epitope tag from simian virus 5"
/note="V5 tag"
/translation="GKPIPNPLLGLDST"
promoter 4680..5009
/note="SV40 promoter"
/note="SV40 enhancer and early promoter"
rep_origin 4860..4995
/note="SV40 ori"
/note="SV40 origin of replication"
promoter 5057..5104
/note="EM7 promoter"
/note="synthetic bacterial promoter "
CDS 5123..5521
/codon_start=1
/gene="Aspergillus terreus BSD"
/product="blasticidin S deaminase"
/note="BSD"
/note="confers resistance to blasticidin"
/translation="MAKPLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTG
VNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGI
KAIVKDSDGQPTAVGIRELLPSGYVWEG"
LTR 5608..5841
/note="3 LTR (Delta-U3)"
/note="self-inactivating 3 long terminal repeat (LTR) from
HIV-1"
polyA_signal 5913..6034
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
rep_origin 6416..6871
/direction=RIGHT
/note="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 6897..7001
/gene="bla"
/note="AmpR promoter"
CDS 7002..7862
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 8033..8621
/direction=RIGHT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
LOCUS Exported 9087 bp ds-DNA circular SYN 09-11-2013
DEFINITION Lentiviral Gateway(R) destination vector for expression of
N-terminally capTEV(TM)-tagged proteins.
ACCESSION .
VERSION .
KEYWORDS pLenti6 capTEV-NT-DEST1
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9087)
AUTHORS Invitrogen (Life Technologies)
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..9087
/organism="synthetic DNA construct"
/lab_host="Mammalian Cells"
/mol_type="other DNA"
promoter 1..229
/note="RSV promoter"
/note="Rous Sarcoma Virus enhancer/promoter"
LTR 230..410
/note="5 LTR (truncated)"
/note="truncated 5 long terminal repeat (LTR) from HIV-1"
misc_feature 457..582
/note="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1075..1308
/note="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
enhancer 1872..2251
/note="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 2252..2455
/note="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
CDS 2510..2812
/codon_start=1
/product="composite tag for in vivo biotinylation, TEV
protease cleavage, and 6xHis tagging"
/note="capTEV(TM)"
/translation="MGAGTPVTAPLAGTIWKVLASEGQTVAAGEVLLILEAMKMETEIR
AAQAGTVRGIAVKAGDAVAVGDTLMTLAGSGSENLYFQGQLENLYFQGQLHHHHHH"
protein_bind 2840..2964
/gene="mutant version of attR"
/bound_moiety="LR Clonase(TM)"
/note="attR1"
/note="recombination site for the Gateway(R) LR reaction"
promoter 2989..3019
/note="lac UV5 promoter"
/note="E. coli lac promoter with an ""up"" mutation"
CDS 3073..3732
/codon_start=1
/gene="cat"
/product="chloramphenicol acetyltransferase"
/note="CmR"
/note="confers resistance to chloramphenicol"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
CDS 4074..4379
/codon_start=1
/gene="ccdB"
/product="CcdB, a bacterial toxin that poisons DNA gyrase"
/note="ccdB"
/note="Plasmids containing the ccdB gene cannot be
propagated in standard E. coli strains."
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
protein_bind complement(4420..4544)
/gene="mutant version of attR"
/bound_moiety="LR Clonase(TM)"
/note="attR2"
/note="recombination site for the Gateway(R) LR reaction"
CDS 4597..4638
/codon_start=1
/product="epitope tag from simian virus 5"
/note="V5 tag"
/translation="GKPIPNPLLGLDST"
promoter 4680..5009
/note="SV40 promoter"
/note="SV40 enhancer and early promoter"
rep_origin 4860..4995
/note="SV40 ori"
/note="SV40 origin of replication"
promoter 5057..5104
/note="EM7 promoter"
/note="synthetic bacterial promoter "
CDS 5123..5521
/codon_start=1
/gene="Aspergillus terreus BSD"
/product="blasticidin S deaminase"
/note="BSD"
/note="confers resistance to blasticidin"
/translation="MAKPLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTG
VNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPGI
KAIVKDSDGQPTAVGIRELLPSGYVWEG"
LTR 5608..5841
/note="3 LTR (Delta-U3)"
/note="self-inactivating 3 long terminal repeat (LTR) from
HIV-1"
polyA_signal 5913..6034
/note="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
rep_origin 6416..6871
/direction=RIGHT
/note="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 6897..7001
/gene="bla"
/note="AmpR promoter"
CDS 7002..7862
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 8033..8621
/direction=RIGHT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"