LOCUS Exported 2912 bp ds-DNA circular SYN 24-6-2015
DEFINITION Cloning vector with a compact MCS for in vitro RNA synthesis, ssDNA
production, and generation of unidirectional deletions.
ACCESSION X65312
VERSION .
KEYWORDS pGEM-9Zf(-)
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 2912)
AUTHORS Promega
TITLE Direct Submission
COMMENT
FEATURES Location/Qualifiers
source 1..2912
/organism="synthetic DNA construct"
/lab_host="Escherichia coli"
/mol_type="other DNA"
misc_feature 5..53
/note="MCS"
/note="multiple cloning site"
promoter complement(54..72)
/note="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(102..118)
/note="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 126..142
/bound_moiety="lac repressor encoded by lacI"
/note="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(150..180)
/note="lac promoter"
/note="promoter for the E. coli lac operon"
rep_origin complement(504..1092)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(1263..2123)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(2124..2228)
/gene="bla"
/note="AmpR promoter"
rep_origin 2255..2710
/direction=RIGHT
/note="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
CDS complement(2702..101)
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/note="lacZ-alpha"
/translation="MITNLAKSASNTTHYRELVDEFQSRAKLTSDAYSIVSPKSAAADQ
VSLALAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWKL"
primer_bind 2851..2867
/note="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 2896..2
/note="SP6 promoter"
/note="promoter for bacteriophage SP6 RNA polymerase"
LOCUS Exported 2912 bp ds-DNA circular SYN 24-6-2015
DEFINITION Cloning vector with a compact MCS for in vitro RNA synthesis, ssDNA
production, and generation of unidirectional deletions.
ACCESSION X65312
VERSION .
KEYWORDS pGEM-9Zf(-)
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 2912)
AUTHORS Promega
TITLE Direct Submission
COMMENT
FEATURES Location/Qualifiers
source 1..2912
/organism="synthetic DNA construct"
/lab_host="Escherichia coli"
/mol_type="other DNA"
misc_feature 5..53
/note="MCS"
/note="multiple cloning site"
promoter complement(54..72)
/note="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(102..118)
/note="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 126..142
/bound_moiety="lac repressor encoded by lacI"
/note="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(150..180)
/note="lac promoter"
/note="promoter for the E. coli lac operon"
rep_origin complement(504..1092)
/direction=LEFT
/note="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(1263..2123)
/codon_start=1
/gene="bla"
/product="beta-lactamase"
/note="AmpR"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(2124..2228)
/gene="bla"
/note="AmpR promoter"
rep_origin 2255..2710
/direction=RIGHT
/note="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
CDS complement(2702..101)
/codon_start=1
/gene="lacZ fragment"
/product="LacZ-alpha fragment of beta-galactosidase"
/note="lacZ-alpha"
/translation="MITNLAKSASNTTHYRELVDEFQSRAKLTSDAYSIVSPKSAAADQ
VSLALAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWKL"
primer_bind 2851..2867
/note="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 2896..2
/note="SP6 promoter"
/note="promoter for bacteriophage SP6 RNA polymerase"